Helicobacter pylori oki828: HPOKI828_04860
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Entry
HPOKI828_04860 CDS
T03728
Name
(GenBank) RNA pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
hpyh
Helicobacter pylori oki828
Brite
KEGG Orthology (KO) [BR:
hpyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpyh03009
]
HPOKI828_04860
Enzymes [BR:
hpyh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
HPOKI828_04860
Ribosome biogenesis [BR:
hpyh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HPOKI828_04860
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AHN43590
LinkDB
All DBs
Position
complement(976331..977065)
Genome browser
AA seq
244 aa
AA seq
DB search
MEKAYKILSVQENISHKKAKALIDLGLVSIGGKKLMVARKELPKNTHFSVQKVEKPSVIF
EDENILALFKPPFIESYDLVSFFKGWVLLHRLDKETSGVILLGRENSEFHLKAKKAFKDR
AVKKEYLALAQGIIEEEQEINAPILTIKTTKAFSKISKKGQEAVTIITPLKIINKKTLLK
VGIKTGRTHQIRVHLKHINHPIIGDTLYNNDPGSAKRLMLHAHKISLLGYEFEAIPLKNL
NFKD
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagcttataaaatattgagcgttcaagaaaacatttcgcataaaaaagccaaa
gctttgattgatttggggttagtgagtataggggggaagaaattgatggtcgccagaaaa
gaattgcccaaaaacacgcattttagcgtccaaaaggttgaaaaacccagcgtgattttt
gaagatgaaaacattctagccctttttaaacccccctttatagagagctatgatttagtt
tcttttttcaaaggttgggttttgttgcaccgcttggataaagaaacaagcggggtgatt
ttattggggagagaaaattcagaattccatttaaaagcgaaaaaggcttttaaagacagg
gcggttaaaaaggagtatttagcgctcgctcaaggcattatagaagaagagcaagaaatt
aacgctcccattctcacgattaaaaccactaaagctttcagtaaaatctctaaaaaaggg
caagaagcggttacgataatcacgcccttaaaaatcatcaataaaaaaacccttttaaaa
gtgggaatcaaaaccggaagaacgcatcaaatcagagtccatttaaagcacatcaaccac
cccattataggcgatacgctttataataatgatccaggttcagccaaacgcttgatgctc
catgcgcataaaatctcgctactagggtatgaatttgaagcgatccccctaaagaatttg
aattttaaggattga
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