Helicobacter pylori oki828: HPOKI828_05295
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Entry
HPOKI828_05295 CDS
T03728
Name
(GenBank) DEAD/DEAH box helicase
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hpyh
Helicobacter pylori oki828
Pathway
hpyh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpyh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HPOKI828_05295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpyh03400
]
HPOKI828_05295
Enzymes [BR:
hpyh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPOKI828_05295
DNA repair and recombination proteins [BR:
hpyh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HPOKI828_05295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
PriA_3primeBD
AAA_19
AAA_22
ADDB_N
nSTAND3
PhoH
AAA_7
AAA_30
CobU
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AHN43650
LinkDB
All DBs
Position
complement(1070977..1072836)
Genome browser
AA seq
619 aa
AA seq
DB search
MFYHLIAPLKNKTPPLTYFSKEQHQKGAIVNIPLRNKTLLGVVLEEVSKPSFECLELEKT
PYFLLPFQIDLAIFIAQYYSANLSSVLSLFTPFKECDLAGLEKIEPVLNALSQTQTNALK
ELQKHSASLLFGDTGSGKTEIYMHSIAQTLEQKKSALLLVPEIALTPQMQQRLKRVFKEN
LGLWHSKLSQTQKKQFLEKLYSQEIKLVVGTRSTLFLPLKELGLIIVDEEHDFSYKSHQS
PMYNARDLCLYLSHKFPIQVILGSATPSLNSYKRFKDKALVRLKGRYTPTQKNIIFEKTE
RFITPKLLEALKQVIDKNEQAIIFVPTRANFKTLLCQNCYKSVQCPFCSVNMSLHLKTNK
LMCHYCHFSSPIPKICSACQSEVLVGKRIGTMQVLNELEGLLKGAKIAILDKDHTSTPKK
LHNILNDFNAQKTNILIGTQMISKGHDYAKVSLAVVLGIDNIIKSNSYRALEEGVSLLYQ
IAGRSARQISGQVFIQSTETDLLENFLEDYEDFLQYELQERCELYPPFSRLCLLEFKHKN
EEKAQQLSLKASQTLSSCLEKGVTLSSFKAPIEKIASSYRYLILLRSKNPLSLIKSVHAF
LKTAPNIPCSVNMDPVDIF
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgttctatcacttaatcgctcctttaaaaaataaaaccccccctttaacttacttttct
aaagagcaacaccaaaaaggagcgatagtcaatatccctttaaggaataaaacgcttttg
ggtgtcgttcttgaagaagtttcaaaaccctcttttgaatgcctagaactagaaaaaacc
ccttattttttactcccctttcaaatagatctcgctatatttatcgctcaatattactcg
gctaatctttcttcagtcttaagcctttttaccccttttaaagaatgcgatttggcgggg
ttagaaaaaattgagcctgttcttaatgcgttaagccaaacgcaaacaaacgctttaaaa
gaattgcaaaaacattcagcaagcttgctctttggcgatacgggtagcgggaaaaccgag
atttatatgcattcaatcgctcaaactttagagcaaaaaaagagcgctttattgttagtg
ccagaaatcgctctcacccctcaaatgcaacaacgccttaaaagggtctttaaagaaaat
ttgggcttgtggcatagcaaactctctcaaacccaaaaaaaacaatttttagaaaagctt
tattcgcaagaaatcaaattagtggtaggcacacgaagcacgttgtttttaccccttaag
gagttgggtttgatcattgtagatgaagagcatgacttttcttataaatcccatcaaagc
cctatgtataacgctagggatttatgcttgtatttatcccataaattccctattcaagtg
attttaggctctgctacgccaagtttaaatagttacaaacgctttaaagataaggcttta
gtgcgcttaaaggggcgctacacgcctacgcaaaaaaacattatttttgaaaaaaccgag
cgttttatcacgcccaaactcctagaagcgctaaaacaagttatagacaaaaacgagcaa
gccattatttttgtgcctacaagggctaatttcaaaaccttgctgtgtcaaaattgctac
aaaagcgttcaatgccccttttgcagcgtgaatatgagtttgcatttaaaaaccaacaaa
ctcatgtgccattattgccatttttcaagccctatccctaaaatttgcagcgcgtgtcaa
agcgaagttttagtgggtaaaaggataggcaccatgcaagtgttgaacgagttggaaggc
cttttgaaaggcgctaaaatagccattttagataaagatcataccagcacgccaaaaaaa
ctccacaatattttaaacgatttcaacgctcaaaaaaccaatatcttaatcggcactcaa
atgataagcaaagggcatgattatgctaaagtgagtttagcggttgttttaggcatagac
aatatcattaaatccaatagttatagggctttagaagaaggcgtgtcgttactttatcaa
atcgcagggaggagcgctaggcaaatttctggccaagtgttcattcaaagcaccgaaacg
gatctattagaaaatttcttagaagattatgaagattttttacaatacgaattgcaagaa
aggtgcgaactctacccgcctttttcaaggctgtgtttgttagaatttaagcataaaaac
gaagaaaaagcccaacaattgagcctaaaagcctctcaaaccctttcttcgtgtttagaa
aagggcgtaacgctctctagctttaaagcccccattgaaaaaatcgcttcttcttatcgc
taccttattttattgcgttccaaaaaccctttaagcctaatcaaaagcgtgcatgcgttt
ttaaaaaccgctcctaatatcccttgcagcgtgaatatggatcctgtggatattttttaa
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