Helicobacter pylori oki828: HPOKI828_05430
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Entry
HPOKI828_05430 CDS
T03728
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hpyh
Helicobacter pylori oki828
Brite
KEGG Orthology (KO) [BR:
hpyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpyh03016
]
HPOKI828_05430
Enzymes [BR:
hpyh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HPOKI828_05430
Transfer RNA biogenesis [BR:
hpyh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPOKI828_05430
Prokaryotic type
HPOKI828_05430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AHN43675
LinkDB
All DBs
Position
1096894..1097622
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AA seq
242 aa
AA seq
DB search
MRCFKATIAYDGAYFLGYAKQPNKLGVQDKIESALNALGIKSVVVAAGRTDKGVHANNQV
LSFCAQKHWNAAKLFYYLAPKLAPHIVLKKLEEKNFHARFDAQKRAYRYLLTKNLKTPFL
APYIACGDYGSLDALNTALKQFTGKHDFSMFKKEGGAMTNPKRAIFNAFAYKTFIAGHEC
VVFKIIGDAFLRSSVRLIIQACVQYSLEKITLAEIQAQIHNAKAAIRTPIMANGLYLHRV
YY
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgttttaaggctactatcgcttatgatggggcgtattttttaggctatgccaaa
cagcccaacaaactcggcgttcaagataagatagagagcgctttaaacgcgctagggatt
aaaagcgttgtggttgcggctgggcgcacggataaaggcgtgcatgcgaacaatcaggtg
ctgtctttttgcgctcaaaaacactggaacgccgctaaattattttattatctagcccct
aaactcgctccgcatattgtcttaaaaaagctagaagaaaaaaacttccatgcgcgtttt
gatgctcaaaaaagagcgtatcgttaccttttgacaaagaatttaaaaacgcctttttta
gcgccttatatcgcttgtggggattatggctcactggatgcgttaaacaccgctttaaag
caattcacaggcaagcatgatttttccatgtttaagaaagaaggcggggcgatgaccaat
cctaaacgcgctatttttaacgcttttgcttataaaacctttatcgcagggcatgagtgc
gtggtgtttaaaatcattggcgatgcgtttttgcgctctagcgtgcgtttgatcattcaa
gcgtgcgtccaatactccttagaaaaaatcacgctcgctgaaattcaagcacaaatccac
aacgccaaagccgctataagaacgcccataatggctaatggcttgtatttgcacagggtg
tattattga
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