KEGG   Helicobacter pylori oki828: HPOKI828_05740
Entry
HPOKI828_05740    CDS       T03728                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
hpyh  Helicobacter pylori oki828
Pathway
hpyh02024  Quorum sensing
hpyh03060  Protein export
hpyh03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hpyh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    HPOKI828_05740
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HPOKI828_05740
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HPOKI828_05740
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hpyh02044]
    HPOKI828_05740
Enzymes [BR:hpyh01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     HPOKI828_05740
Secretion system [BR:hpyh02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   HPOKI828_05740
  Eukaryotic Sec-SRP protein
   HPOKI828_05740
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_31 AAA_22 Zeta_toxin AAA_30 AAA_24 nSTAND3 SLFN-g3_helicase cobW AAA_17 AAA_19 NPHP3_N ArsA_ATPase 6PF2K APS_kinase AAA_14 AAA_16 Fer4_NifH T2SSE AAA_11 AAA AAA_33 NTPase_1 ABC_tran ParA Thymidylate_kin ResIII KTI12 NACHT AAA_5 TsaE PhageMin_Tail ParBc AAA_18 ATP_bind_1 YqeC
Other DBs
NCBI-ProteinID: AHN43730
LinkDB
Position
complement(1157054..1158400)
AA seq 448 aa
MFQALSDGFKNALNKIRFQDDEKALDRALDELKKTLLKNDVHHKVARELLKKVESQTKLN
GIGKQQFLDALEKSLLEILSAKGSSGFTFAQTPPTVVLMAGLQGSGKTTTTAKLAHYLKT
KNKKVLLCACDLQRLAAVEQLKVLGEQVGVEVFYEENKSVKEIANNALKRAKEAQFDVLL
VDSAGRLAIDKELMQELKEIKEILNPHEVLYVADALSGQDGVKNANTFNEEIGVSGVVLS
KFDSDSKGGIALGITYQLGLPLRFIGSGEKIPDLDVFVPERIVGRLMGAGDIISLAEKTA
SVLNPNEAKDLSKKLKKGQFTFNDFLNQIEKVKKLGSMSSLISMIPGLGNMANALKDTDL
ESSLEVKKIKAMVNSMTKKEQENPEILNGSRRKRIALGSGLEVSEINRIIKRFDQASKMA
KRLTNKKGISDLMNLMSQAKNQTPPKMR
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgtttcaagcattaagcgatgggtttaaaaacgcactcaataaaatccgctttcaagat
gatgaaaaagccctagatcgggcgttagatgagttgaaaaaaacgcttttgaaaaatgat
gtgcatcataaagtggctagagaattgctcaaaaaagtggaaagtcaaaccaaacttaat
ggcattggcaagcagcaatttttagacgctttagaaaagagtttgttagaaattttaagc
gctaaagggagcagtggttttactttcgctcaaacgccccccaccgtggttttaatggca
ggtttgcaagggagcggtaagacaaccaccaccgccaaactcgctcattatttaaaaacc
aaaaataaaaaagtgcttttatgcgcatgcgatttgcaacgcctagcggcagtggagcaa
ttaaaggttttgggcgaacaggtgggcgtagaagttttttatgaagaaaataaaagcgtg
aaagaaatcgctaacaacgctttaaaaagggctaaagaagcgcaatttgatgttttgctc
gtggatagcgcggggcgtttagccattgataaagagcttatgcaagaattaaaagaaatt
aaagaaatcttaaacccccatgaggtgctgtatgtcgcagacgcattgagcgggcaagat
ggggtcaaaaacgcgaacacctttaatgaagaaataggcgtgagtggggtggtgttaagc
aaatttgacagcgattctaaagggggtatcgccttaggcatcacttaccaattaggctta
cccttgcgttttattgggagcggggaaaaaatccctgatttagatgtgtttgtgcctgaa
aggattgtggggcgtttgatgggggctggagatattatctcgctcgctgaaaaaaccgcc
agcgttttaaaccctaatgaagccaaagatttaagcaaaaaactcaaaaaagggcaattc
actttcaatgactttttaaaccagattgaaaaagtgaaaaaattaggctctatgagttct
ctaatctctatgattccaggtttagggaatatggcaaacgcgctaaaagacacggattta
gaaagctctttagaagtgaaaaaaatcaaggctatggtcaattccatgaccaaaaaagag
caagaaaaccccgagattttaaacggcagccgaagaaaaaggatcgctttagggagcggc
ttagaagtgtctgaaatcaatcgcatcatcaaacgctttgatcaagcgagcaaaatggcg
aaacgcttaacgaataaaaagggcattagcgatttgatgaatctaatgagtcaggctaaa
aatcaaacaccccctaaaatgcgctga

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