KEGG   Helicobacter pylori oki828: HPOKI828_06990
Entry
HPOKI828_06990    CDS       T03728                                 
Name
(GenBank) type III restriction endonuclease
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
hpyh  Helicobacter pylori oki828
Brite
KEGG Orthology (KO) [BR:hpyh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hpyh02048]
    HPOKI828_06990
Enzymes [BR:hpyh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     HPOKI828_06990
Prokaryotic defense system [BR:hpyh02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   HPOKI828_06990
SSDB
Motif
Pfam: ResIII HI_1054_N DEAD HI_1054_C SWI2_SNF2 SLFN-g3_helicase AAA_34 Methyltrans_RNA
Other DBs
NCBI-ProteinID: AHN43949
LinkDB
Position
complement(1385150..1387489)
AA seq 779 aa
MFEMATGSGKTLVMAGLILECYKQGYQNFIFFVNSTSILEKTKLNFIDSVSSKYLFSENI
TINDENTEIKSINNLNESQTSAINIYFSTIQGLFSLFTKAKENAITLEDLKDQKLVFLAD
EAHHLNTETKKKLSDAESNEKHNWESVVKLALEQNKDNLLLEFSATIPNEKSVEDKYKNL
KVITYTLKEFSEDKFCKNIYSLSYENKELETRFLGACVSSLYKELLAQHHNVESFKPCIL
FKSERIEDSKENQERFNAFLENLSPLDLENFFNHSRNTFFKDAKNFFDKQHYTPNLAALL
QTKFKKSVQINTNNEKELEKSMLLLNSLEDRDNPKRVIFSVDKLNEGWDVLNLFDIVRLK
NKASQKDTTKDAQLIGRGARYYPFSYNDLKPNQIEFYQRKFDLFNPLSALERLDYHAIYD
SEFIAKLKEELQDLGLGFANEKQTIPLTPTKRFKYYYASNTKDKNKNLFNKDYTDPVKVK
LQSLHVPLFAFGVREKKVDFKEENKGDTTYYIPHTLDKIPINYFLKALNLKNLDFKTLKK
AFKKHAFNNKVGFIECYISPLKTNFHKNQKFDDNKILLKLAVYIIENLKDTLLKEQDKYD
VSALELKEFETHNKSLSASELEKDIPLYEWLLFKDMRKLDSDLERDFLDFINDHKEVLDK
KFKEWCVLRNDHFTELKVFCNIENSPHYAQGFEPDFILFAQTHSDEFLGFTCYMEAKGEH
LEHSNVWKEEFLEMLENAALKSHNKKLDLKGLPFFTLHNSVVNSEFTTAFDQIFKDQEC
NT seq 2340 nt   +upstreamnt  +downstreamnt
atgtttgaaatggcaacaggtagcggtaaaaccttagtgatggcgggtttgattttagaa
tgctacaaacaaggctatcaaaactttatcttttttgtgaatagcaccagcattttagaa
aaaaccaagcttaattttatagacagcgtttcatcaaaatatctttttagtgaaaatatc
actatcaatgatgaaaacacagaaattaaaagcatcaataatttaaacgagagccaaaca
agcgctatcaacatttattttagcaccattcaaggcttgttttccttattcactaaagct
aaagaaaacgctatcaccctagaggatttaaaagatcaaaaattagtttttttagcggat
gaagcgcaccatttaaacacagagactaaaaagaaattaagcgatgcagagtccaatgaa
aaacacaactgggaaagcgttgtgaaattagcgctagaacaaaataaagacaatttattg
ctggaatttagtgctactatccctaatgaaaaaagcgttgaagacaaatataaaaactta
aaggtgatcacttacaccttaaaagaatttagcgaggataaattttgcaaaaacatctac
tccctttcttatgaaaataaagaattagaaacgcgctttttaggggcatgcgtttcaagt
ttgtataaagaattattagcccaacaccacaatgttgaaagctttaaaccatgcattttg
tttaaaagcgagaggattgaagatagcaaagaaaatcaagagcgcttcaacgccttttta
gaaaatttaagccctttagatttagaaaattttttcaatcacagccgcaacacttttttt
aaagacgctaaaaacttttttgacaagcaacattacacccctaaccttgccgcattattg
caaacgaaattcaaaaaaagcgttcagattaacaccaataacgaaaaagaattagaaaag
agcatgcttttattgaactccctagaagacagagacaaccctaaaagagtgatttttagc
gtggataagctcaatgaaggctgggatgtgttgaatttgtttgacattgtcaggcttaaa
aataaagcgagccaaaaagacaccactaaagacgcccagctcatagggcgaggagcgaga
tactacccctttagctataacgatttaaaaccaaaccaaatagagttttaccaacgcaag
tttgatctttttaaccccttaagcgcattagaaaggttagactaccatgctatttatgac
agcgagtttatcgctaaattaaaagaagagttacaagatttaggattaggatttgcaaat
gaaaaacagactatccctttaacacccaccaagcgtttcaaatactactatgcgagcaat
acaaaagacaaaaataaaaacctattcaataaagactatacagaccctgttaaagtcaaa
ctccaaagtttgcatgtccctttatttgcttttggcgtgcgtgaaaagaaagtggatttt
aaagaagaaaataagggcgatacaacttattatataccccataccttagataaaatccct
ataaattattttttaaaagcccttaatttaaaaaacctggatttcaaaacacttaaaaaa
gcctttaaaaaacatgcctttaacaataaagtgggatttatagagtgctatatttctcca
ttaaaaacaaactttcataaaaatcaaaagtttgacgacaacaaaatccttttaaaactc
gctgtttatatcattgagaacttaaaagacacgcttttaaaagagcaagataaatacgat
gtgagcgcgttagaattaaaagaatttgaaacgcataataaaagccttagcgctagtgaa
ttggaaaaagatattcccctttatgaatggctgctttttaaagacatgagaaaactagac
agcgatttagaaagggattttttagatttcatcaacgaccataaagaggttttagacaag
aaattcaaagaatggtgcgttttaaggaatgaccatttcactgaattaaaagttttttgc
aatatagaaaatagccctcattatgcacaaggttttgaaccggattttatcctttttgcc
caaacgcatagcgatgaatttttaggcttcacttgttatatggaagctaaaggcgaacat
ttagagcattctaacgtttggaaagaagaatttttagaaatgctagaaaacgccgcgctt
aaaagccataacaaaaaattagatttaaaaggcttgccgtttttcacgctccataatagc
gtagtaaatagcgaatttacaaccgctttcgatcaaatctttaaggatcaagaatgttaa

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