Helicobacter pylori oki828: HPOKI828_07310
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Entry
HPOKI828_07310 CDS
T03728
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hpyh
Helicobacter pylori oki828
Pathway
hpyh03030
DNA replication
hpyh03430
Mismatch repair
hpyh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpyh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPOKI828_07310
03430 Mismatch repair
HPOKI828_07310
03440 Homologous recombination
HPOKI828_07310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpyh03032
]
HPOKI828_07310
03400 DNA repair and recombination proteins [BR:
hpyh03400
]
HPOKI828_07310
Enzymes [BR:
hpyh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPOKI828_07310
DNA replication proteins [BR:
hpyh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPOKI828_07310
DNA repair and recombination proteins [BR:
hpyh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPOKI828_07310
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AHN43999
LinkDB
All DBs
Position
complement(1441567..1445202)
Genome browser
AA seq
1211 aa
AA seq
DB search
MKENKAFTHLHLHTEYSLLDGANKIKILAKRIKELGMKSVSVTDHGNMFGAIDFYTSMKK
EGIKPIIGMEAYIHNDDNLSSKETKQRFHLCLFAKNQEGYENLMFLSSMAYLEGFYYFPR
INKKLLREHSKGIIASSACLQGEVNYHLNTNNERNRKYGAKGYDEAKKIACEYQEIFEDD
FYLEIMRHGILDQRFIDEQVIKMSLETGLKIIATNDTHYTMPNDAKAQEVAMCVAMGKTL
NDKGRLKHSVHEFYIKSPEEMAKLFADIPEALENTQEIADKCVLEIDLKDDKKNPPTPPS
FKFTKAYAQNEGLNFEDDASYFAYKAREGLKERLVLVPKEKHDQYKERLEKEIEVITSMK
FPGYMLIVWDFIRYAKEMGIPVGPGRGSAAGSLVAFALKITDIDPLKYDLLFERFLNPER
VSMPDIDTDFCQRRRKEIIEYMIEKYGKYNVAQVITFNKMLAKGVIRDVARVLDMPYKEA
DDFAKLIPNRLGITLKGYEKNGEFIEGAWELEPKIKELVESNELAKQVWEYSLNLENLNR
NAGVHAAALVVDSQKELWHKTPLFASEKTGGIVTQYSMKYLEPVDLIKFDFLGLKTLTVI
DDALKIIKTQHKISVDFLSLDMDDPKVYKTIQSGDTVGIFQIESGMFQGLNKRLRPSSFE
DIIAIIALGRPGPMESGMVDDFVNRKHGIEPIAYAFKELESILKPTYGTIVYQEQVMQIV
QTIGGFSLGEADLIRRAMGKKDAQIMADNKAKFVEGAKNLGHDGQKAANLWDLIVKFAGY
GFNKSHSAAYAMITFQTAYLKTYYKHEFMAAMLTSESNKIESVARYIDEVRALEIEVMPP
HINSSMQDFSVAEFKNQKGELEKKIVFGLGAIKGVGGEPIKNIIEERAKGDYKSLEDFIS
RVDFSKLTKKSLEPLVKSGSLDNLGYTRKTMLANLDLICDAGRAKDKANEMMQGGNSLFG
AMDGGTKEQVILDMIDLGEHDAKTLLECEYETLGIHVSGNPLDEFKEEIKGFKNLVKSID
IEELEIGSQAYLLGKIMEVKKKIGKRSGKPYGTADILDRYGKFELMLFEKQLSALEELDI
NKPLVFKCKIEEQEEVARLRLFEILDLESAREVKIPKARYKDPEKQKEEVREIPPIEILA
SSSCSLAIVLENDVKKEFLRQIKESALKHQGKRPLYLIIKDKDKQFKIQSDLMVSEKIKD
DFKGLEWRDLA
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagaataaagctttcacgcatttgcacttgcacacggaatattcgcttttagac
ggggcgaacaagattaaaattctagccaaacgcattaaagaattgggcatgaaaagcgtg
agcgtaactgaccatgggaacatgtttggagcgattgatttttatacgagcatgaaaaaa
gaaggcattaagcctatcatcggcatggaagcgtatatccataatgacgacaacctttct
agcaaagaaaccaagcagcgcttccatttgtgcctattcgctaaaaaccaagagggctat
gaaaatttgatgtttttaagctctatggcgtatttagaagggttttattatttcccgcgc
atcaataaaaagcttctaagggagcattctaaaggcattatcgcttctagcgcgtgtttg
caaggggaagtcaattaccatttgaacactaataatgagagaaaccgcaagtatggggct
aaaggctatgatgaagccaaaaaaatcgcttgcgaataccaggagatttttgaagacgat
ttttatttagaaatcatgcgccatggcattttagatcagcgattcattgatgagcaagtc
attaaaatgtctttagaaacagggttaaaaatcattgccaccaacgacacccactacacc
atgcctaatgacgccaaagctcaagaagtggcgatgtgcgtagcgatgggtaaaactcta
aacgataaggggcgcttgaaacactccgtgcatgagttttatattaagtcccctgaagaa
atggcaaagctctttgcggatattccagaagctttagaaaacacccaagaaatcgctgat
aaatgcgttttagagattgatttaaaagacgataaaaagaaccccccaacccctccaagc
ttcaaattcactaaagcttacgctcaaaatgaggggctgaattttgaagatgacgcttct
tattttgcttataaggctagagagggcttgaaagagcgcttggttttagtgcctaaagaa
aaacatgatcaatacaaagaacgcttagaaaaagaaattgaagtcattacgagcatgaaa
ttcccggggtatatgctgattgtgtgggattttatccgttacgctaaagaaatgggcatt
cctgtagggcctggtagggggagtgcggctgggagtttggtggcttttgctttaaaaatc
accgatattgaccccttgaaatacgatttgctctttgaaaggtttttaaaccctgaaaga
gtcagcatgcctgatattgatacggatttttgccagcgccggcgtaaggaaatcatagaa
tacatgattgaaaaatacggcaaatacaatgtggctcaagtcatcacctttaataagatg
ttggctaaaggcgtgatcagagatgtcgcaagggttttggacatgccttataaagaagcc
gatgattttgccaaactcatacccaaccgcttaggcatcacgcttaagggctatgaaaaa
aatggcgagttcatagagggggcgtgggaattagagcctaaaatcaaggaattagtagag
agtaatgaattagccaaacaagtgtgggagtattcgctcaatttagagaatttgaatcgt
aacgcgggcgtgcatgccgcagccttagtggtggatagccaaaaagagttgtggcacaaa
acccctttgtttgcctctgaaaaaaccggtggtatcgttacgcaatattccatgaagtat
ttagagccggtggatttgattaagtttgactttttggggcttaaaaccttgaccgtgatt
gatgatgcgcttaaaatcattaaaacgcagcacaaaattagcgtggattttttatcgttg
gatatggacgatccgaaagtgtataaaacgatccaaagcggggatacggtggggatattc
caaattgaatccgggatgtttcaagggctcaacaaacgcttaaggccttcaagctttgaa
gacattatcgccattatcgcgctaggcagaccagggcccatggaatcaggcatggtagat
gattttgtgaacagaaagcatggcattgagcctatcgcttatgcgtttaaagaattagag
tcgattttaaagcccacttacggcacgattgtctatcaagagcaagtgatgcaaatcgtg
caaactatcggcggttttagtttgggtgaagcggatttgatccgccgcgctatggggaaa
aaagacgctcaaatcatggcggacaataaggctaagtttgtagaaggcgctaaaaattta
gggcatgacggccaaaaggcggctaatttgtgggatttgatcgttaaatttgccggctat
ggtttcaacaaatcgcattcggccgcttatgcgatgatcactttccaaacggcgtattta
aagacttattacaagcatgagttcatggcagcgatgctcactagcgaatccaataagatt
gaatccgtggcacgctatattgatgaggtcagggctttagaaattgaagtgatgccccca
cacatcaattcttctatgcaagatttcagcgtggcggagtttaaaaatcaaaagggcgag
ctggaaaagaaaatcgtgtttggtttaggagcgattaaaggggttgggggtgagccgatt
aaaaacatcattgaagaaagggctaaaggggattataagagtttagaagattttatttca
cgggtggatttttctaaactcactaaaaaatctttagagccattggtgaaatcagggagc
ttggataatttaggctacacccgaaaaaccatgctcgctaacttggatctgatctgtgat
gctgggcgcgctaaagacaaggctaatgaaatgatgcaagggggtaactccctttttggg
gcaatggatggtgggacaaaagagcaggttattttagacatgattgatttgggcgaacat
gacgctaaaacgcttttagaatgcgaatacgagactttaggcatccatgtttcaggcaat
cccttagacgagtttaaagaagaaattaagggctttaaaaatttagtcaaaagcattgat
attgaagagttagaaatcggctcgcaagcttatttgctgggtaaaatcatggaagttaaa
aagaaaattggcaaacgaagcggtaagccttatggcacagcggacattttggacagatac
ggcaagtttgaactcatgctgtttgaaaagcaattgagtgctttagaagagttggatatt
aataagcctttagtgtttaaatgcaagattgaagagcaagaagaagtggcgcgattaagg
ctttttgaaatcttggatttagagagcgctagagaggttaaaatccctaaagcccgttat
aaagaccctgaaaagcaaaaagaagaggtgcgcgaaatcccccccattgaaatacttgcc
tctagttcttgctctttagcgatcgtgttagaaaacgatgtgaaaaaagaatttttaaga
caaatcaaagagagcgctttaaaacaccagggcaaacgccccttgtatttgatcatcaaa
gataaggataagcaattcaaaatccaaagcgatttaatggtaagtgaaaaaattaaggac
gattttaaagggttagagtggagggatttagcttga
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integrated database retrieval system
