Helicobacter pylori UM037: K750_03025
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Entry
K750_03025 CDS
T02659
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
hpyi
Helicobacter pylori UM037
Pathway
hpyi00300
Lysine biosynthesis
hpyi00470
D-Amino acid metabolism
hpyi01100
Metabolic pathways
hpyi01110
Biosynthesis of secondary metabolites
hpyi01120
Microbial metabolism in diverse environments
hpyi01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hpyi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
K750_03025
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K750_03025
Enzymes [BR:
hpyi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
K750_03025
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AGL69558
UniProt:
A0AB33Z678
LinkDB
All DBs
Position
complement(1004098..1005315)
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AA seq
405 aa
AA seq
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MFNYEELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHL
ESGADCVSIGEIHRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELKMIE
TIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPV
SVHFHIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYD
YAQGILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPS
LYHAKHAIRVITPSKGRKISPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGS
SMASQYNSRPKLLELALEDHKIRVIRKREALEDLWRLEEEGLKGV
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtttaattatgaagagctgtttcaaacgcacaaaacccctttttacctctatgatttt
gacaaaatcaaacaggcttttttgaattataaagaagcgtttaaggggcgtaagtctttg
atttgctacgctttaaaggcgaattccaatttgagtatcctctctttattggcccattta
gagagcggggcggattgcgtttccataggcgagatacacagggctttaaaagctgggatt
aagccttataggatcgtgtttagcggggtgggtaaaagcggatttgaaatagaacaagcc
ctaaaactcaacattttatttttgaatgtagaaagttttatggaattaaaaatgattgaa
acaatcgctcaatctttagggataaaggctaggatttccattcgaatcaaccctaacatt
gacgctaaaacgcacccctatatttctaccggtttgaaagaaaataagtttggcgtggga
gaaaaagaagctttagaaatgtttctttgggctaaaaaaagcgcgtttttagagcctgtt
agcgtgcattttcatatcggctcacagctattagatttagagccgattatagaagcgagc
caaaaggtggctaaaatcgctaaatctttgatcgcgctagggatagatttgcgctttttt
gatgtgggcggagggattggcgtgagttatgaaaatgaagaaacgattaagctttatgat
tacgcgcaagggattttaaacgcgcttcaaggcttggatttgaccattatttgtgagccg
ggccgctcgatcgtggctgagagtggggaattgatcacgcaggttttgtatgaaaaaaag
gctcaaaacaagcgctttgtaatcgtagatgcgggtatgaatgattttttgcgccccagt
ttgtatcatgctaagcatgccataagggttataacgccttctaaaggtcgtaagatttcg
ccttgcgatgtggtagggcctgtgtgtgagagcagcgacacttttttaaaagacgcccat
ttgccagaattagagccgggcgataaaatagcgattgagaaggttggggcttatggctct
agcatggccagtcaatacaattcgcgccccaaactcttagaattagccctagaagatcac
aaaatcagagtgataagaaaaagagaggctttagaagatttgtggcggctagaagaagaa
ggcttaaaaggggtttga
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