KEGG   Helicobacter pylori UM037: K750_06015
Entry
K750_06015        CDS       T02659                                 
Name
(GenBank) RNA polymerase sigma54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
hpyi  Helicobacter pylori UM037
Pathway
hpyi02020  Two-component system
hpyi02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:hpyi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    K750_06015
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    K750_06015
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hpyi03021]
    K750_06015
Transcription machinery [BR:hpyi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     K750_06015
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID DUF3288
Other DBs
NCBI-ProteinID: AGL70147
UniProt: A0AB33Z5Z9
LinkDB
Position
383317..384561
AA seq 414 aa
MAILRANLSPKNKLNATLKGWLPILQSELEDLEEVLKQNALDNPLIKIENKRIKNFSDRF
SAKKSSDHLENSAIASKSLFETLEAQIIPPLFPTETSQKIAMDIISGLNSEGYFEENIEE
RARILGVESEVYEKVRKRFSYLNPAGIGAKDVKESFLFQLESRELDDNELYEETRKIILN
LEKHHEFSKDFYYEKALKILKSFKNPPAIEFLEKEIEVIPELFILEVDDEIIVRLNDESY
PTISLEENRFENSDYLKDKLKEAKDLIDALNLRKATIYKIGLMLLEYQYDFFKGKELRPL
KLLDLANEFNHSVSTISRAISNKYLACERGVFPIKHFFSTALDNSETSNAVIKDYLLELI
KNEDKKEPLSDAKILELIEEKFHLKMVRRTITKYRQLLNIASSSERKKLYLMRA
NT seq 1245 nt   +upstreamnt  +downstreamnt
atggcgatcttacgcgcaaaccttagccctaaaaacaaattaaacgctaccttaaagggg
tggctccccattttacaaagcgagcttgaagatttagaagaagtgttgaaacaaaacgct
ttagataaccccttaatcaaaattgaaaacaaacgcattaaaaattttagcgatcgtttt
agcgctaaaaagagcagcgatcatttagaaaattccgcaatcgcatctaaaagccttttt
gaaaccttagaagctcaaatcattccccctctctttcctactgaaacctctcaaaaaatc
gctatggatattatcagcgggttaaatagtgaagggtattttgaagaaaacattgaagaa
agggctagaattttaggggtagagagcgaagtttatgaaaaagtgcgcaagcgttttagt
taccttaatccagccggcattggcgctaaagatgtgaaagagagctttttattccagtta
gagagtagggaattagacgataatgagctttatgaagaaacgcgaaaaatcattttaaat
ttagaaaaacaccatgaattttctaaagatttttattacgaaaaggctttaaagatttta
aaatcctttaaaaaccccccagccattgagtttttagaaaaagaaatagaagtcattcct
gaactttttattttagaagtggatgatgaaatcatcgtgcgtttgaatgatgaaagctac
ccgacgatcagtttagaagaaaatcgctttgagaatagtgattatttaaaagacaaatta
aaagaggctaaagatttgattgacgcgctaaatttgagaaaagccacgatttataaaatc
ggtctcatgcttttagagtatcaatacgatttttttaagggtaaggaattgcgtccttta
aagctattagatttagccaatgagtttaaccactctgtaagcacgatttcaagggccatt
tctaataaatatttggcatgcgaaaggggggttttccctattaagcatttctttagcacc
gccttagacaatagcgagacttcaaacgctgtgattaaagactatcttttagaattgatc
aaaaacgaagacaaaaaagagcctttgagcgacgctaagattttagaactcattgaagaa
aaattccatttgaaaatggtgagaagaacgatcaccaaataccgccaattgctcaacatc
gcttcttcaagcgaaaggaaaaagctctatttgatgcgcgcttga

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