Helicobacter pylori UM037: K750_06015
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Entry
K750_06015 CDS
T02659
Name
(GenBank) RNA polymerase sigma54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
hpyi
Helicobacter pylori UM037
Pathway
hpyi02020
Two-component system
hpyi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hpyi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K750_06015
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K750_06015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpyi03021
]
K750_06015
Transcription machinery [BR:
hpyi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K750_06015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF3288
Motif
Other DBs
NCBI-ProteinID:
AGL70147
UniProt:
A0AB33Z5Z9
LinkDB
All DBs
Position
383317..384561
Genome browser
AA seq
414 aa
AA seq
DB search
MAILRANLSPKNKLNATLKGWLPILQSELEDLEEVLKQNALDNPLIKIENKRIKNFSDRF
SAKKSSDHLENSAIASKSLFETLEAQIIPPLFPTETSQKIAMDIISGLNSEGYFEENIEE
RARILGVESEVYEKVRKRFSYLNPAGIGAKDVKESFLFQLESRELDDNELYEETRKIILN
LEKHHEFSKDFYYEKALKILKSFKNPPAIEFLEKEIEVIPELFILEVDDEIIVRLNDESY
PTISLEENRFENSDYLKDKLKEAKDLIDALNLRKATIYKIGLMLLEYQYDFFKGKELRPL
KLLDLANEFNHSVSTISRAISNKYLACERGVFPIKHFFSTALDNSETSNAVIKDYLLELI
KNEDKKEPLSDAKILELIEEKFHLKMVRRTITKYRQLLNIASSSERKKLYLMRA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcttacgcgcaaaccttagccctaaaaacaaattaaacgctaccttaaagggg
tggctccccattttacaaagcgagcttgaagatttagaagaagtgttgaaacaaaacgct
ttagataaccccttaatcaaaattgaaaacaaacgcattaaaaattttagcgatcgtttt
agcgctaaaaagagcagcgatcatttagaaaattccgcaatcgcatctaaaagccttttt
gaaaccttagaagctcaaatcattccccctctctttcctactgaaacctctcaaaaaatc
gctatggatattatcagcgggttaaatagtgaagggtattttgaagaaaacattgaagaa
agggctagaattttaggggtagagagcgaagtttatgaaaaagtgcgcaagcgttttagt
taccttaatccagccggcattggcgctaaagatgtgaaagagagctttttattccagtta
gagagtagggaattagacgataatgagctttatgaagaaacgcgaaaaatcattttaaat
ttagaaaaacaccatgaattttctaaagatttttattacgaaaaggctttaaagatttta
aaatcctttaaaaaccccccagccattgagtttttagaaaaagaaatagaagtcattcct
gaactttttattttagaagtggatgatgaaatcatcgtgcgtttgaatgatgaaagctac
ccgacgatcagtttagaagaaaatcgctttgagaatagtgattatttaaaagacaaatta
aaagaggctaaagatttgattgacgcgctaaatttgagaaaagccacgatttataaaatc
ggtctcatgcttttagagtatcaatacgatttttttaagggtaaggaattgcgtccttta
aagctattagatttagccaatgagtttaaccactctgtaagcacgatttcaagggccatt
tctaataaatatttggcatgcgaaaggggggttttccctattaagcatttctttagcacc
gccttagacaatagcgagacttcaaacgctgtgattaaagactatcttttagaattgatc
aaaaacgaagacaaaaaagagcctttgagcgacgctaagattttagaactcattgaagaa
aaattccatttgaaaatggtgagaagaacgatcaccaaataccgccaattgctcaacatc
gcttcttcaagcgaaaggaaaaagctctatttgatgcgcgcttga
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