Helicobacter pylori oki898: HPOKI898_01230
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Entry
HPOKI898_01230 CDS
T03729
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hpyj
Helicobacter pylori oki898
Pathway
hpyj00260
Glycine, serine and threonine metabolism
hpyj00460
Cyanoamino acid metabolism
hpyj00630
Glyoxylate and dicarboxylate metabolism
hpyj00670
One carbon pool by folate
hpyj00680
Methane metabolism
hpyj01100
Metabolic pathways
hpyj01110
Biosynthesis of secondary metabolites
hpyj01120
Microbial metabolism in diverse environments
hpyj01200
Carbon metabolism
hpyj01230
Biosynthesis of amino acids
hpyj01240
Biosynthesis of cofactors
hpyj04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hpyj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HPOKI898_01230
09102 Energy metabolism
00680 Methane metabolism
HPOKI898_01230
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HPOKI898_01230
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HPOKI898_01230
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HPOKI898_01230
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HPOKI898_01230
Enzymes [BR:
hpyj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HPOKI898_01230
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AHN44388
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Position
236023..237273
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AA seq
416 aa
AA seq
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MAYFLEQTDSEIFELIFEEYKRQNEHLEMIASENYTFPSVMEAMGSILTNKYAEGYPNKR
YYGGCEVVDKIESLAIERAKKLFNCQFANVQAHSGSQANNAVYHALLKPYDKILGMDLSC
GGHLTHGAKVSLTGKHYQSFSYGVNLDGYIDYEEALKIAQSVKPEIIVCGFSAYPREIDF
KKFREIADEVGALLLGDIAHVAGLVVANEHAHPFPHCHVVSSTTHKTLRGPRGGLILTND
EEIAAKIDKAIFPGTQGGPLMHAIAAKAVGFKENLKPEFKAYAKLVKSNMQVLAKALKEK
NHKLVSGGTSNHLLLMDFLDKPYSGKDADIALGNAGITVNKNTIPGETRSPFVTSGIRIG
SAALSARGMGAKEFEIIGDKISDILNDINNVSLQLHVKEELKAMANQFPVYQQPIF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattttttagaacaaacggatagtgaaatttttgaattgatctttgaagaatat
aagcggcaaaatgagcatttagaaatgatagcgagcgagaattacacttttcctagtgtt
atggaagctatgggaagcattttaacgaataaatacgctgagggctatcctaacaagcgc
tattatggaggctgtgaagtggtggataaaatagaaagcctagccatagaaagggctaaa
aagctttttaattgccagttcgctaacgtgcaagcgcattcaggctcacaagccaataac
gctgtctatcacgctcttttaaagccttatgacaagattttaggcatggatttaagctgt
ggagggcatttaacgcatggcgctaaagtgagtttaaccggcaagcattatcagagcttt
tcttatggcgtgaatttggatggctatattgattatgaagaagcactaaaaatcgctcag
agcgttaagccagaaatcattgtgtgcgggttttcagcctatccaagggagattgatttt
aagaaatttagagaaatcgctgatgaagtgggggcgttactattaggcgatatagcccat
gtggcagggcttgtggtcgctaatgagcatgcccatcctttcccgcattgccatgtggtt
tcaagcaccactcataagaccttaagagggcctagagggggacttattttaactaatgat
gaagagatagcggctaagattgataaagcgatctttccagggactcaaggcgggcctttg
atgcatgcgattgctgctaaagcggtggggtttaaagagaatctaaaaccagaatttaaa
gcttatgcaaaattagtgaaatctaacatgcaagttttggctaaagcgttaaaagaaaaa
aaccataagttagtgagcggtggcacttctaaccatttgcttttgatggatttcttagat
aagccttatagcgggaaagacgctgatattgcattagggaatgccggaatcaccgtgaat
aaaaacaccattcctggcgaaacgcgcagcccttttgtaacgagcgggataaggattggc
tcagcggcattgagcgcaaggggcatgggagctaaagaatttgaaatcataggggataaa
atatcagatattttgaatgatattaataatgttagtttgcaattgcatgtgaaagaagaa
ttgaaagccatggctaatcaattccctgtgtatcaacaacctattttttaa
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