Helicobacter pylori oki898: HPOKI898_02130
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Entry
HPOKI898_02130 CDS
T03729
Name
(GenBank) ABC transporter permease
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
hpyj
Helicobacter pylori oki898
Pathway
hpyj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hpyj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HPOKI898_02130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hpyj02000
]
HPOKI898_02130
Enzymes [BR:
hpyj01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
HPOKI898_02130
Transporters [BR:
hpyj02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HPOKI898_02130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_membrane_2
AAA_22
RsgA_GTPase
AAA_16
ABC_ATPase
DEAD
AAA_29
nSTAND1
AAA_30
KAP_NTPase
nSTAND3
AAA_5
cobW
DUF87
NACHT
Motif
Other DBs
NCBI-ProteinID:
AHN44557
LinkDB
All DBs
Position
422142..423797
Genome browser
AA seq
551 aa
AA seq
DB search
MKLFFRRYSKYLKEHYKSFIVVLFSSLVVALSTAWGTYLVKPTLDEIFINKDTQMLKILP
FLVILAYLGKSGGMYLGTYFTNFIGLDIVKKIRNTMLESLLKMEMDFFNRTKKGELIARI
TNDIGLIRASLSNYLSESLREGLTIVGLVGVVIYQSPKLALVGLVIMPLAAIPISKIIRK
VKKLAKSHQESNAKITARLSEVFNNVEAIKISNGEKLEHKAFVKENEAFFKIGIKNIAVA
EISSPLMEFLGSIAIALVIYLGGNEVIRGHISVGAFFSFITALFMLYTPIKRLTRIVSNF
QEALVASDRIHEILEREPAIVDGELTLDDAIHTIEFKKVWLAYALDNQERYVLSDISLKF
QQNEIIALKGESGSGKSSLVNLILRLYEPSRGEIFINDQKIESITQKSLREKISVVTQRV
FIFNGSVAENVAYGLEIDEVTIKECLKKAQALDFVEKMPHGIESVLDEFGANLSGGQRQR
IAIARALYKDAQVLIFDEATSALDNHTEESVKQSILELKQNRLIILISHNPSTLKLATKH
VKLEHGRLIEC
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
ttgaaactctttttcaggcgttattctaaatatcttaaagagcattataaaagttttata
gtggttttattttcttctttagtggtggctttaagcacggcttgggggacttatttagtc
aagcccactttagatgaaatttttatcaataaagacactcaaatgcttaaaatcttgcct
tttttagtgattttggcgtatttgggcaagagtgggggcatgtatttaggcacttatttc
actaactttatcgggcttgatattgtcaaaaaaatacgcaacaccatgttagaaagcctt
ctaaaaatggaaatggatttttttaacaggactaaaaagggcgaattgatcgcaaggatc
accaatgacataggtttgattagagcgagtttgtccaattacctttcagagagcctaaga
gaggggctaacgattgtggggttagtgggggtggtgatctatcaaagccctaaattagca
ttagtggggctagtgatcatgccgctagctgctattcctatcagcaaaatcattcgtaag
gttaaaaaactcgctaaatcccaccaagagagtaacgccaaaatcaccgctcgtttgagc
gaagtctttaacaatgtggaagcgattaaaatctctaatggcgaaaaattagagcataag
gcttttgtgaaagaaaatgaagcgttttttaaaatcggtatcaaaaacatcgccgtggct
gaaatttcttcgcctttaatggagtttttaggctctatcgctatagcgctagtgatttat
ttaggggggaatgaagtgattaggggccatattagcgtgggggcgtttttttctttcatc
acggccctttttatgctctatacgccgatcaaacgcttaaccaggattgtttctaatttt
caagaagccttagtcgctagcgacaggatccatgagattttagaaagagagccggctatt
gttgatggggaattgacgctagatgacgctatacacaccatagaatttaaaaaggtatgg
ctcgcttatgcactagacaatcaagagcgttatgttttaagcgatattagtttgaaattc
caacaaaatgaaatcatcgctctaaaaggcgaaagcgggagcggtaaaagctcattagtg
aatctgattttacgcctttatgagccaagcaggggcgaaattttcatcaatgatcaaaaa
atagagagcatcactcaaaaatccttgagggaaaagattagcgttgtcactcaaagggtg
tttatttttaacgggagcgtggctgaaaatgtggcgtatggtttagagattgatgaggtg
acaatcaaagaatgcctaaaaaaagctcaagccttagattttgtggaaaaaatgcctcat
gggatagagagcgttttagatgaatttggcgctaatcttagcggcggccaacgccaaaga
atcgccattgcaagagctttgtataaagacgctcaagttttaatctttgatgaagccact
tccgctttagacaatcacacagaagagagcgttaaacaaagcattttagaattgaaacaa
aaccgcttgatcattctcatctcgcacaacccaagcacgcttaaattagccactaagcat
gtgaaattagagcatgggcgtttgatagaatgctaa
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