Helicobacter pylori oki898: HPOKI898_02855
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Entry
HPOKI898_02855 CDS
T03729
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
hpyj
Helicobacter pylori oki898
Brite
KEGG Orthology (KO) [BR:
hpyj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpyj03032
]
HPOKI898_02855
03036 Chromosome and associated proteins [BR:
hpyj03036
]
HPOKI898_02855
03400 DNA repair and recombination proteins [BR:
hpyj03400
]
HPOKI898_02855
DNA replication proteins [BR:
hpyj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HPOKI898_02855
Chromosome and associated proteins [BR:
hpyj03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HPOKI898_02855
DNA repair and recombination proteins [BR:
hpyj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HPOKI898_02855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AHN44694
LinkDB
All DBs
Position
complement(566389..566778)
Genome browser
AA seq
129 aa
AA seq
DB search
MLDLSLGFDYNYRSISQAKRLNRLVLASIRKGVIHMNKAEFIDLVKEAGKYNSKREAEEA
ISAFTLAVETALSKGESVELVGFGKFETAEQKGKEGKVPGSDKTYKTEDKRVPKFKPGKI
LKQKVEEGQ
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgatttatctttaggatttgattataattatcgctcaatcagtcaagctaaacga
ttaaatcgcttggttttagcatctattagaaaaggggttatccacatgaacaaagcagaa
tttattgatttggttaaagaagcaggtaaatacaacagcaaaagagaagccgaagaagcg
atcagtgcctttactctagcggtagagacagctttaagcaagggtgaaagcgtggagttg
gttggttttggcaaatttgaaaccgcagagcaaaaaggcaaagaaggtaaagtgccagga
agcgataaaacttataaaactgaagacaaacgggtgcctaaattcaaacccggcaaaatc
cttaaacaaaaagttgaagaaggccaataa
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