Helicobacter pylori oki898: HPOKI898_03460
Help
Entry
HPOKI898_03460 CDS
T03729
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hpyj
Helicobacter pylori oki898
Pathway
hpyj03030
DNA replication
hpyj03430
Mismatch repair
hpyj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpyj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPOKI898_03460
03430 Mismatch repair
HPOKI898_03460
03440 Homologous recombination
HPOKI898_03460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpyj03032
]
HPOKI898_03460
03400 DNA repair and recombination proteins [BR:
hpyj03400
]
HPOKI898_03460
Enzymes [BR:
hpyj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPOKI898_03460
DNA replication proteins [BR:
hpyj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPOKI898_03460
DNA repair and recombination proteins [BR:
hpyj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPOKI898_03460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
Atrophin-1
RCF1-5-like_lid
DNA_pol3_gamma3
AAA_5
EH_Signature
AAA_30
DEAD
AAA_assoc_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AHN44806
LinkDB
All DBs
Position
682202..684016
Genome browser
AA seq
604 aa
AA seq
DB search
MQVLALKYRPKHFSELVGQESVAKTLSLALDNQRLANAYLFSGLRGSGKTSSSRIFARAL
MCEEGPKAVPCDTCIQCQSALNNHHIDIIEMDGASNRGIDDVRNLIEQTRYKPSFGRYKI
FIIDEVHMFTTEAFNALLKTLEEPPSHVKFLLATTDALKLPATILSRTQHFRFKKIPENS
VISHLKTILEKEQVSYETSALEKLAHSGQGSLRDTITLLEQAINYCDNAITESKVAEMLG
AIDRSVLEDFFQSLINQDEARLQERYAILENYETESVLEEMMLFLKAKLLSPDSYSILLI
ERFFKIIMSGLSLLKEGANASFVLLLLKMKFKEALKLKALDDAILELEQSKESVLKPLNQ
NANAPKQEPKSAEKIEKPEKRESAETPQTPMLSAKDRIFHNLFKQVQTLVYERNYELGAV
FEKNICFVDFDSQTKTLTWESLATHKDKELLRERFKIVKSIVDGVFGKGENIKIALKHHL
ENKSAREETKEIKDFKISSLREKILPKPTTETTAETKEKEVQKNEIKEKEIKEKEIKEKE
IKEKEIKEKEIKEKEIKEKEIKEKEIKEIQPKEAPTALQEFMANHSNLIEEIKSEFEIKS
VELL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttttagcgttaaaataccgccccaaacattttagcgagctagtcggtcaagag
agcgtggctaaaacgctttctttagccctagacaaccagcgtttggctaacgcttattta
ttcagcgggttaagaggttcagggaaaaccagctcttctaggatttttgctagggcttta
atgtgtgaagaagggccaaaagccgtgccttgcgatacttgcatccaatgtcagagcgct
ttaaacaaccaccatatagatattatagaaatggacggggcgtctaatagggggattgat
gatgtccgtaatctcatagagcaaacgcgctacaaaccaagctttgggcgctataaaatc
tttatcattgatgaagtgcatatgttcaccaccgaagcgtttaacgcgcttttaaagact
ttagaagagcctcctagccatgtgaaattccttttagcgacaacggacgccttgaaattg
cccgctaccatactcagccgcacccagcatttcaggtttaaaaaaatccctgaaaattcc
gttatttctcatttaaaaaccattttagaaaaagaacaagtgagttatgaaacaagcgcg
ttagaaaaactggctcacagcgggcaagggagcttaagagatacgatcactcttttagaa
caagccatcaattattgcgataacgctatcacagaaagcaaagtggctgaaatgttagga
gcgattgacaggagcgttttagaagatttttttcaaagcctaatcaaccaagatgaagcg
cggttgcaagagcgttatgccattttagaaaattatgaaaccgagagcgttttagaagaa
atgatgctttttttgaaagcgaaattattaagccctgattcgtattccatccttttaata
gagcgcttttttaaaatcattatgagcggtttgagccttttaaaagaaggggctaatgcc
agttttgtgctgttgttattgaaaatgaaattcaaagaagctttgaaactcaaagcccta
gacgatgcgattttggaattagagcaaagtaaagaaagcgttttaaagcccttaaaccaa
aacgctaacgcccctaaacaagaacccaaaagcgcagagaaaatagaaaagccagaaaaa
agagaaagtgcagaaaccccgcaaacccccatgctttcagccaaagatcgcatttttcac
aaccttttcaaacaagttcaaacattggtttatgagcgcaactacgaattaggggcggtg
tttgaaaaaaatatctgttttgttgattttgacagccagactaaaaccttgacttgggag
tctttagccacccataaagataaagagcttttaagagagcgttttaaaatcgtgaaaagt
atcgttgatggggtttttggcaagggcgaaaatatcaaaatcgctttaaaacatcatttg
gaaaataaaagtgctagagaagaaactaaagagattaaggattttaaaatttcttcttta
agggaaaaaatcttacccaaaccaaccaccgaaaccacggctgaaactaaagaaaaagag
gttcaaaaaaacgagattaaagaaaaagaaattaaagaaaaagaaattaaagaaaaagag
attaaagaaaaagagattaaagaaaaagaaattaaagaaaaagagattaaagaaaaagag
attaaagaaaaagagattaaagaaatccaacccaaagaagcccctacagccttgcaagaa
ttcatggctaaccattctaatctcattgaagagattaagagcgagtttgaaatcaaaagc
gtggaattgttatga
DBGET
integrated database retrieval system
