Helicobacter pylori oki898: HPOKI898_03815
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Entry
HPOKI898_03815 CDS
T03729
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hpyj
Helicobacter pylori oki898
Pathway
hpyj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpyj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPOKI898_03815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpyj03019
]
HPOKI898_03815
Enzymes [BR:
hpyj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HPOKI898_03815
Messenger RNA biogenesis [BR:
hpyj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HPOKI898_03815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
AHN44870
LinkDB
All DBs
Position
complement(767541..768749)
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AA seq
402 aa
AA seq
DB search
MFELDKELKELFDIYEKSPYELYLVGGCVRDCLMGITPKDYDLTSNALVNESKELLLKRH
FRVLETGIKHGTITALKNDQSYEITTFRIEKGHIKHRKPKELVFSARLTDDLKRRDFSMN
AIAYSPTKGIIDPFKGQNAIRNQTIECVGEVRLRFFEDALRILRSLRFSATLGFKIAPST
KEAVFACKDLLKHLSKERLQSELNKLLMGKNAYEVAKEYQEILELVIQEKIENLGFLKNA
PFNLELRLLGFFKHQKSLENLRYPKKTCVLFSKAKECHKAFLNIHNKTELKFLLKNYDLE
PFNLALDFYALKNPKHALKIKSLLKEIFNANEPFKKEHLALKGGTLQSLGYQHQQIGEIL
NACLNLIIAHPKNNALEWLIEWVKDNYLPNDVINFSPIGRKN
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgaactagacaaagaattaaaagaattgtttgacatttatgaaaaatccccctat
gagctttacttagtaggggggtgcgtgcgcgattgtttgatgggaattaccccaaaagat
tacgatttgacctcaaacgctttagtcaatgaaagcaaagagcttcttttaaagcgccat
tttagggtgctagaaaccggtatcaaacatggcacgatcacggctcttaaaaacgatcaa
agctatgaaattacaacctttagaattgaaaaagggcatatcaaacaccgaaagcctaaa
gaattggtttttagcgctcgtttgacagacgatttaaagcggcgcgattttagcatgaat
gcgatcgcttatagccctacaaaagggattattgatccttttaaagggcagaatgcgatt
agaaatcaaacgattgaatgcgtgggggaagtgcgattgaggttttttgaagacgcttta
aggattttaagatcgctgcgatttagcgcgactttaggctttaaaatagcgccaagcact
aaagaagcggtttttgcgtgtaaggatttgttaaaacacctttctaaagaacgcttacaa
agtgaattgaataagcttcttatggggaaaaacgcctatgaagtggctaaagaatatcaa
gaaattttagagttggttattcaagaaaaaatagaaaatttagggtttttaaaaaacgcg
cctttcaatttggaattaagattattggggttttttaagcatcaaaaaagtttagaaaat
ttacgctaccctaaaaaaacttgtgttttattttcaaaagctaaagaatgccacaaagct
tttttaaatattcataataaaacagaattaaaatttttattaaaaaactacgatttagag
ccttttaatttggctttagatttttatgcgctcaaaaaccccaaacacgctttaaaaatt
aaaagcttgttaaaagaaatatttaacgctaacgaaccttttaaaaaagaacacctagcc
cttaagggcgggacgcttcaaagcttgggttaccaacaccaacaaatcggcgaaatttta
aacgcatgcctaaatttaatcatcgctcaccctaaaaacaacgctttagagtggctgatt
gaatgggttaaagataattatttacctaatgatgttataaacttttcgccaataggcaga
aaaaattaa
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