Helicobacter pylori oki898: HPOKI898_04525
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Entry
HPOKI898_04525 CDS
T03729
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hpyj
Helicobacter pylori oki898
Brite
KEGG Orthology (KO) [BR:
hpyj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpyj03032
]
HPOKI898_04525
03400 DNA repair and recombination proteins [BR:
hpyj03400
]
HPOKI898_04525
Enzymes [BR:
hpyj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HPOKI898_04525
DNA replication proteins [BR:
hpyj03032
]
Prokaryotic type
DNA Topoisomerases
HPOKI898_04525
DNA repair and recombination proteins [BR:
hpyj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPOKI898_04525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AHN45000
LinkDB
All DBs
Position
complement(920491..922812)
Genome browser
AA seq
773 aa
AA seq
DB search
MQNYQSHSIKVLKGLEGVRKRPGMYIGDTNVGGLHHMVYEVVDNAVDESMAGFCDTINIT
LTDEGSCIVEDNGRGIPVDIHPTEKIPACTVVLTILHAGGKFDNDTYKVSGGLHGVGVSV
VNALSKRLIMTIKKEGQIYRQEFEKGIPISELEIIGKTKSAKESGTTIEFFPDESVMEVV
EFQAGILQKRFKEMAYLNDGLKISFKEEKTQLQETYFYEDGLKQFVKDSAKKELLTPIVA
FKSMDEETRTSIEVALAYADDYNENTLSFVNNIKTSEGGTHEAGFKMGLSKAILQYIDNN
IKTKESRPISEDIKEGLIAVVSLKMSEPLFEGQTKSKLGSSYARALVSKLVYDKIHQFLE
ENPNEAKIIANKALLAAKAREASKKARELTRKKDNLSVGTLPGKLADCQSKDPLESEIFL
VEGDSAGGSAKQGRDRVFQAILPLKGKILNVEKSHLSKILKSEEIKNMITAFGCGIQESF
DIERLRYHKIIIMTDADVDGSHIQTLLMTFFYRYLRPLIEQGHVYIAQAPLYKYKKGKTE
IYLKDSVALDHFLIEHGINSVDIEGIGKNDLMNLLKVVCHYRYALLELEKRYNLLEILRF
LIETKDALSLDMKVLEKSILEKLEGLNYQILRSFATEESLHLHAQTPKGLVEFNLDDNLF
KEVLFEEAHYTYQKLMEYNLDFLENKDILAFLEEVENHAKKGANIQRYKGLGEMNPNDLW
ETTMHKENRSLIKLKIEDLEKTDAVFSLCMGDEVEPRRAFIQAHAKDVKQLDV
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattaccagagccatagtattaaggttttaaaaggcttagagggggttaggaaa
cgccctggaatgtatattggcgatactaatgtgggtgggttgcaccacatggtgtatgaa
gtcgtggataacgctgtggatgagagcatggcgggtttttgcgatacgattaatatcact
ttgactgatgagggttcatgcatcgtagaagataacgggcgaggtattcctgtagatatt
caccccacggaaaaaatccccgcttgcactgtggttttaacgattttgcatgcggggggc
aagtttgataatgacacttataaagtttcaggcggtttgcatggcgtgggcgtttcggtt
gtgaacgctttaagcaaacgcttgattatgaccattaaaaaagagggtcaaatctatcgc
caagagtttgaaaagggtatccccattagcgagcttgaaatcattggcaaaaccaaaagc
gctaaagaaagcggcacgactattgaatttttccctgatgaaagcgtgatggaagtcgtt
gaatttcaagcgggtattttgcaaaaacgcttcaaagaaatggcgtatcttaatgatggc
ttaaaaatttctttcaaagaagaaaaaacccaactgcaagagacttatttctatgaagac
ggcttgaaacaattcgttaaagacagcgctaaaaaagaattgctcacccccattgttgcg
tttaaaagcatggacgaagaaacgcgcacttctatagaagtcgctctagcgtatgctgat
gattataatgaaaacaccttaagctttgtgaataacattaaaacttctgagggcggcacg
catgaggcgggctttaaaatgggcttgtctaaagcgattttacaatacattgacaataac
attaaaaccaaagagtcgcgccccatctctgaagacattaaagaggggttgatcgctgtt
gtgagcttgaaaatgagcgagcctttgtttgaagggcagactaaatccaaactcggtagc
tcgtatgcgcgcgcgttggtttcaaaattagtctatgacaaaatccatcaatttttagaa
gaaaaccctaacgaagccaaaatcatcgctaataaagccctactagccgcaaaagccaga
gaagccagcaagaaagccagagagcttacaaggaaaaaggataatttgagtgtcggcacc
ttgcctggaaaattagccgattgccagagtaaagaccccttagagagtgaaatcttttta
gtggagggcgatagcgcgggcgggagcgctaaacaagggcgcgatagggttttccaggcg
atcttgcccttaaagggtaagattttaaatgtggaaaaaagccatttgtcaaagatccta
aaatcagaagaaattaaaaacatgatcacggcttttgggtgtggcattcaagagagtttt
gatatagaaagattgcgctatcataaaatcattatcatgaccgatgctgatgtggatggg
agccatatccaaaccttgctgatgacttttttctatcgttatttacgcccgctgattgaa
caagggcatgtttatatcgctcaagcccctctttacaaatacaagaaaggcaagacagaa
atttatcttaaagacagcgtcgctttggatcattttttaattgagcatggcatcaattcg
gtggatattgaagggattggcaagaacgatttgatgaatttgttaaaagtggtgtgccat
taccgctatgcacttttggaattagaaaaacgctacaatttgctagaaattttacgcttt
ttgattgagactaaggacgctttaagccttgatatgaaagttttagaaaaaagcatttta
gaaaaattagagggcttgaattatcagatcttacgctcttttgccactgaagaaagcttg
catttgcacgcgcaaacccctaagggcttggtggaatttaacctagatgacaacctcttt
aaagaagtgttgtttgaagaagcgcattacacctaccaaaaacttatggagtataattta
gatttcttggaaaataaggatattttggcgttcttagaagaagtggaaaatcacgctaaa
aagggagcgaatatccagcgctataagggattgggtgagatgaaccctaatgatttatgg
gaaacgaccatgcataaagaaaaccgcagcttaatcaaactcaaaattgaagatttggaa
aaaactgatgcagtcttttcgctttgcatgggcgatgaagtggagcctagaagagccttt
atccaagcgcatgctaaagatgtgaaacagctagatgtgtaa
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