Helicobacter pylori oki898: HPOKI898_04835
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Entry
HPOKI898_04835 CDS
T03729
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hpyj
Helicobacter pylori oki898
Brite
KEGG Orthology (KO) [BR:
hpyj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpyj03016
]
HPOKI898_04835
Enzymes [BR:
hpyj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HPOKI898_04835
Transfer RNA biogenesis [BR:
hpyj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPOKI898_04835
Prokaryotic type
HPOKI898_04835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
GutM
Motif
Other DBs
NCBI-ProteinID:
AHN45052
LinkDB
All DBs
Position
994440..995585
Genome browser
AA seq
381 aa
AA seq
DB search
MNLNFMPLLHAYNHASIDFHFNPSARDFCVHEVPLYDFSNTGEHAVIQVRKSGLSTLEML
QIFSQILGVRIAELGYAGLKDKNALTTQFISLPKKYAPLLEKNTSNFQEKNLKILSLNYH
YNKIKLGHLKGNRFFMRFKKMTPLNAQKTEQVLEQIVRFGMPNYFGSQRFGKFNDNHQEG
LKILQNQTKFARQKLNAFLISSYQSYLFNALLSKRLEISKIISSFSLKENLEFFKQKDLN
VDSNTLKTLKNQAHPFKILEGDVMCHYPYGKFFDALKLEKESERFLKKEAAPTGLLDGKK
ALYAKNLSLEIEKEFQHNLLSSHAKTLGSRRFFWVFAENVTSQYIKEKAQFELGFYLPKG
SYASALLKEIKHEKGENNDEF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaattttatgcccctattgcatgcttataaccatgcgagcattgattttcat
ttcaatcctagcgctagggatttttgcgtgcatgaagtgcctttgtatgattttagcaac
acaggcgaacatgccgttattcaagtgagaaaaagcggtttaagcactttagaaatgctt
caaattttttctcaaattctaggggtaagaatcgctgaattgggttatgcgggcttgaaa
gataaaaacgcactgacgactcaattcatctcactccctaaaaaatacgcccctttatta
gaaaaaaacacgagcaactttcaagaaaaaaaccttaaaatcctgtctttgaactaccat
tataataaaatcaaattagggcatttaaaggggaatcgcttttttatgcgttttaaaaaa
atgacccccctaaacgctcaaaaaacggagcaggttttagaacaaatcgtgcggtttggc
atgcctaattattttggatcgcagcgctttgggaagttcaatgacaaccaccaagagggt
ttaaaaatcttacaaaatcaaacgaaattcgcccgtcaaaaattaaacgcttttttaatt
tcaagctatcaaagttatttgtttaacgcgcttttaagcaaacgattagaaatcagtaaa
atcattagctcttttagcctaaaagaaaatttggaattttttaaacaaaaagatttaaat
gttgattcaaacactctaaaaacccttaaaaaccaagcccacccctttaaaatcttagaa
ggcgatgtgatgtgccattacccttatgggaagttttttgacgctttaaaattagaaaaa
gaaagcgaaaggtttttgaaaaaagaagctgcgcctacagggttattagacggcaaaaaa
gctctttatgcaaaaaatttgagtttagaaattgaaaaagaattccagcataacctttta
agtagccatgctaaaacgctaggctctaggcggtttttttgggtgtttgcagaaaatgta
acttctcaatatatcaaagaaaaagcgcaatttgaattgggattttacttgcctaaaggg
agttatgcgagtgcgttgctcaaagaaatcaagcatgagaaaggagaaaataatgacgaa
ttttga
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