KEGG   Helicobacter pylori oki898: HPOKI898_05340
Entry
HPOKI898_05340    CDS       T03729                                 
Name
(GenBank) hypothetical protein
  KO
K12053  ComB4 competence protein
Organism
hpyj  Helicobacter pylori oki898
Brite
KEGG Orthology (KO) [BR:hpyj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hpyj02044]
    HPOKI898_05340
Secretion system [BR:hpyj02044]
 Type IV secretion system
  DNA uptake competence system protein
   HPOKI898_05340
SSDB
Motif
Pfam: CagE_TrbE_VirB TrwB_AAD_bind DUF87 TraG-D_C AAA_29 FtsK_SpoIIIE AAA_23 RsgA_GTPase AAA_19 AAA_22 NTPase_P4 ABC_tran CTD8
Other DBs
NCBI-ProteinID: AHN45130
LinkDB
Position
complement(1090636..1093053)
AA seq 805 aa
MLEKIFTSLCSLVPKRYSMKEETNIVGIYNEHYLLSEKSNLVGTLKLEGISYLSLDDKEI
AQKFNERILALNEIVDGVHFKIVARRRKIFIHHEYTQEEISNPFALEVINLWEQGVEDVY
QNFYYLIFETKNDSIKGYLERFKKKITTNELENIQENNKQDEVKYQENYFIGFDNFNLAD
KSKILDSIINNVKNMLSGLFVEKIDANSLLNFYAEYINGVPSEYTFFRGRLHDGMINSDV
HFKKDFFTHIHNSKEIFKRFISIKTYDIDKIVSTALSSVLHLSLEFDVILNIDNIPKAKA
EKRIETKRKRANKIIRVEIDELNDLIKTDRVLMQEISLNILVHAKTKTDLDSACIEITNL
LKQKGIVSTQESIGMLPMFFSFFPNRNRLNFRKRLLSSQNIASLIVLEKQNCGFSRNSWG
DRHLTIFRNQDKSPYLFNFHAYEAKKNDMVSGHTIIFGGTGAGKTTLIEFLITNCFKYED
LSILALDRNNGMRVMTEFLDGQYNDSNDFYINPFSLKDTSTNCTFLVSWLAFMLNIDEDT
KDEKKKTLSALSKTIRVCYNNITKQGGAIFKLRDFKDTLERDYLDSKDILEKESSKDLYK
HSTDCLDFAKKLSVIDMDALSSSKKDFNLAVLYLFYKVMNRAKLENKPFYIFIDEAKSVI
ENPIMLAKIKDTLAQARKLNGVLTLAFQDINQLDGVEGSKSIIENAAQVILYPTNNFEKL
ESYGILLSPIEKSFLNKTPLNARQVLVKNLLTQSSVFLEINLEKLNSTSKKFLRAYNSSA
SSVFELETLKKDNPKDYKEIYLTKE
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgcttgaaaaaattttcacttctttatgctcgctagttcctaagcgttatagcatgaaa
gaagaaactaacattgttggcatttataatgagcattatcttttaagtgaaaaatcaaac
cttgtaggcactcttaaattagagggaatttcttatttgtctttagatgacaaagaaata
gcgcaaaaattcaatgaacgcattttagctcttaatgagattgtagatggagtgcatttt
aaaatcgtagctagaaggcgtaagattttcatacaccatgaatatactcaagaggagata
agcaatccttttgcattagaggttatcaatttatgggagcagggggttgaggatgtttat
caaaatttctattacttaatttttgaaactaagaatgatagcattaaaggttatttggaa
cgatttaagaaaaaaatcactaccaatgaattagaaaatattcaagaaaataataaacaa
gatgaagttaaatatcaagaaaactatttcataggctttgataattttaatttagcagat
aaatctaaaatattagacagcattatcaataatgttaaaaacatgctttctggcttgttt
gtagaaaaaatagatgccaatagtttgcttaatttttatgcggaatatatcaatggtgtt
cctagtgaatacactttttttagaggtcgtttgcatgatggcatgattaattctgatgtg
cattttaaaaaagattttttcactcacattcataatagtaaagagattttcaagcgtttc
atcagcattaagacttatgatatagacaaaattgtcagcaccgctctttcttcagtgttg
catttatctttagaatttgatgtgattttaaacattgacaatattcctaaagcaaaggct
gaaaaaaggattgaaactaaaagaaaaagagcgaataagattattagagttgaaattgat
gaattgaatgaccttattaaaacagacagagttttaatgcaagagatttctttaaacatt
ttagttcatgccaaaactaaaaccgatttagatagtgcttgtatagaaattaccaatttg
cttaaacaaaaaggtattgtaagcacacaagaaagtattggcatgttgcctatgtttttt
agcttcttccccaatcgtaatcgcttgaattttagaaagcgtttgttgtctagtcaaaat
attgcttctttaatcgtattggaaaaacaaaattgtggtttttctagaaattcatggggc
gatcgccatttaactatttttagaaaccaagacaaatcgccttatttattcaatttccat
gcttatgaggcaaaaaaaaatgatatggtatcagggcataccatcatctttggtggcaca
ggggctggtaaaaccactttaattgaatttttaatcaccaattgttttaagtatgaagat
ttaagtattttggctttagacagaaataatggcatgcgtgtgatgactgagtttttagat
ggtcaatacaacgatagcaatgatttttacattaatccgttttctttaaaagatacaagc
actaactgcacctttttagtgagttggttggcatttatgctcaatattgatgaagatact
aaagatgaaaaaaaaaagactttaagcgctttatccaaaacaatcagagtttgctataac
aatatcacaaaacaagggggtgctatttttaagttaagagattttaaagacacgctagaa
agagactatttagatagcaaagacattttagaaaaagagagctcaaaagacttatacaag
cattctactgattgtttagactttgctaaaaagctttctgttattgatatggatgctctt
tctagtagtaaaaaagatttcaacttggcagtgctatacctattctacaaagtcatgaat
agagctaaattagaaaacaagcctttttatatcttcattgatgaagcaaaatctgttatt
gaaaatcccatcatgttagctaaaatcaaagacacactcgctcaagctagaaaactcaat
ggggttttaactttagcctttcaagacattaaccaacttgatggcgtagagggatcaaag
tccattatagaaaacgccgctcaagtcatactctatcctacaaacaattttgagaaatta
gagagctatggcattttattaagtcctattgaaaaatcctttttaaacaaaacgccgtta
aacgctaggcaagtattagtgaaaaaccttctcactcaatctagtgtatttttagaaatc
aatttagaaaagctaaacagcaccagtaaaaaatttttaagagcgtataactctagcgcg
tctagcgtttttgaactggaaacgcttaaaaaggataatccaaaggattataaagaaatt
tacttgacaaaggagtag

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