Helicobacter pylori oki898: HPOKI898_05550
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Entry
HPOKI898_05550 CDS
T03729
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
hpyj
Helicobacter pylori oki898
Pathway
hpyj03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hpyj00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HPOKI898_05550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hpyj03011
]
HPOKI898_05550
Ribosome [BR:
hpyj03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HPOKI898_05550
Bacteria
HPOKI898_05550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
S1CSD-TOTE-1
CsrA
RuvA_N
CBFD_NFYB_HMF
RuBisCo_chap_C
Chordopox_A30L
EXOSC1
Motif
Other DBs
NCBI-ProteinID:
AHN45161
LinkDB
All DBs
Position
1130174..1131844
Genome browser
AA seq
556 aa
AA seq
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MSKIADDQNFNDEEENFAKLFKKELEKEETLEKGTIKEGLIVSINENDGYAMVSVGCKTE
GRLALNEITDEKGQLLYQKNDPIIVHVSEKGEHPSVSYKKAISQQKIQAKIEELGENYEN
AIIEGKIVGKNKEGYIVESQGVEYFLSRSHSSLKNDANHIGKRIKACIIRVDKENHSINI
SRKRFFEVNDKRQLEVSKELLEAIEPVLGVVRQITPFGIFVEVKGVEGLVHYSEISHKGP
VNPEKYYKEGDEVCVKAIAYDEEKRRLSLSIKATIEDPWEEIQDKLKPGYAIKVVVSNIE
NYGAFVDIGNDIEGFLHVSEISWDKNVSHPSNYLSVGQEIDVKIIDIDPKNRRLRVSLKQ
LTNRPFDVFESKHQVGDVLEGKVATLTDFGAFLNLGGVDGLLHNHDAFWDKDKKCKDHYK
IGDVIKVKILKINKKDKKISLSAKHLVTSPTEEFAQKHKTDSVIQGKVVSIKDFGVFINA
DGIDVLIKNEDLNPLKKDEIKIGQEITCVVVAIEKSNNKVRASVHRLERKKEKEELQAFN
TSDDKMTLGDILKEKL
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagatagcagatgatcagaactttaatgacgaggaggaaaacttcgcaaaactc
tttaaaaaagaattagaaaaagaagaaaccctagaaaaaggcactatcaaagaagggcta
atcgtttccatcaatgagaatgatggttatgccatggtgagcgtgggctgtaagacagaa
ggccgtttggctttgaatgagatcaccgatgaaaaggggcagttgctgtatcaaaaaaat
gaccccattatcgtgcatgtgtccgaaaaaggtgaacaccctagcgtttcctacaaaaag
gccatttcccaacaaaagattcaggctaaaattgaagaattaggcgaaaactatgaaaac
gccattattgaaggcaagatcgtaggcaagaataaagagggctatatcgtggagtctcaa
ggcgtggagtattttctctcccgctcgcactcttctttaaagaatgacgcaaaccatatc
ggcaaacgcattaaagcgtgcatcattcgtgtggataaggaaaaccattctatcaatatt
tctcgcaaacgattctttgaagtcaatgacaaacgacagcttgaagtttctaaagaattg
ttagaagctatagagccggtgttaggggttgtgcgccagatcaccccttttggtattttt
gtagaagttaagggggttgagggtttagtccattattctgaaatcagccataaaggaccg
gtaaaccctgaaaaatactacaaagagggcgatgaagtctgtgtcaaagccatcgcttat
gatgaagaaaaaagacgcctttcactctccataaaagcgaccatagaagacccatgggaa
gagatccaagacaagctaaaacccggatacgccattaaggtggtggtgagcaatattgaa
aattatggggcgtttgtggatattggtaatgatattgaaggctttttgcatgtttctgaa
atctcttgggataaaaatgtcagccaccctagcaactacttgagcgtggggcaagagatt
gatgtgaagatcattgacattgatccaaaaaaccgccgcttaagggtttctttaaagcaa
ctcactaacaggccttttgatgtttttgaatccaaacaccaagtgggagatgttttagaa
ggcaaagtggcgactttaacggattttggggcgtttttgaatttgggtggggtggatggt
ttgctccacaatcacgacgctttttgggataaagataaaaaatgcaaagaccactataaa
attggcgatgtgatcaaagtgaaaatccttaaaatcaacaaaaaagataaaaagatttct
ttgagtgcgaagcacttggttacttcccctacagaagaattcgctcaaaagcataaaaca
gatagcgtgattcaaggtaaagtggtgagtattaaggattttggcgttttcattaatgct
gatggcattgatgtgctgatcaaaaatgaagatttgaaccccttgaaaaaagatgaaatc
aaaatagggcaagaaatcacatgcgtggtggttgcgattgaaaaatctaacaacaaggtg
cgcgcttctgtgcataggttagagcgcaaaaaagaaaaagaagaattgcaagcttttaac
acgagcgatgataaaatgactttaggggatattcttaaagaaaaactctaa
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