Helicobacter pylori oki898: HPOKI898_07125
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Entry
HPOKI898_07125 CDS
T03729
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hpyj
Helicobacter pylori oki898
Pathway
hpyj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpyj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPOKI898_07125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpyj03400
]
HPOKI898_07125
Enzymes [BR:
hpyj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HPOKI898_07125
DNA repair and recombination proteins [BR:
hpyj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPOKI898_07125
Prokaryotic type
HPOKI898_07125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHN45447
LinkDB
All DBs
Position
complement(1425966..1426667)
Genome browser
AA seq
233 aa
AA seq
DB search
MKLFDYAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKSPKTIFPKSSNLFYALNLTPPS
AVKIILLGQDPYHSTYLKNEQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANLGVPVPC
CGDLSAWAKRGMLLLNAILSVEKNQAASHKRIGWEAFSDQILVRLFEANAPLIVVLLGKV
AQKKIALIPKNKHIIITAPHPSPLSRGFLGSGVFTSVQKAYREVYHKDFDFSL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttttgactacgctcctttaagcttggcttggcgggagtttttacaaagcgaa
tttaaaaagccttattttttagaaatagaaaaacgctacttagaagctctaaaaagccct
aaaaccattttccctaaaagctctaatctgttttacgcgctcaatctaacgcctcctagt
gcggttaaaatcatccttttagggcaagacccctaccattccacctacctaaaaaatgag
caagaattgcctgtggcgatgggcttaagctttagcgtggaaaaaaacgcccccatcccc
ccaagcttaaaaaatatttttaaagaattgcatgcgaatttaggcgtgcctgtgccttgt
tgtggggatttgagcgcgtgggctaaaaggggtatgctgttattgaacgccattttaagc
gtggaaaaaaaccaagccgcttcgcacaaacgcatcggctgggaagcttttagcgatcaa
atattggtgcgcctttttgaagccaacgcccccttaatcgtggtgttattagggaaagtc
gcccaaaaaaagatcgctctaatccccaaaaacaagcacatcatcatcaccgctcctcac
cctagccccttatctagggggtttttagggagtggggtttttacaagcgttcaaaaagct
tatagagaggtttatcataaggattttgattttagtttatga
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