Helicobacter pylori oki898: HPOKI898_07740
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Entry
HPOKI898_07740 CDS
T03729
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
hpyj
Helicobacter pylori oki898
Pathway
hpyj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpyj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPOKI898_07740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpyj03400
]
HPOKI898_07740
Enzymes [BR:
hpyj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
HPOKI898_07740
DNA repair and recombination proteins [BR:
hpyj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HPOKI898_07740
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
T2SSM_b
Motif
Other DBs
NCBI-ProteinID:
AHN45556
LinkDB
All DBs
Position
complement(1547919..1548671)
Genome browser
AA seq
250 aa
AA seq
DB search
MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFEFKGYFDFWNCAIKK
GYSGVVTFTKKEPLSVSYGINIEEHDKEGRVITCEFESFYLVNVYVPNSQQALSRLSYRM
SWEVEFRKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNELLNA
GFIDTFRYFYPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSHPLKTRLKDALIYKDILGS
DHCPVGLELV
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgatttcatggaatgtgaacgggttaagagcttgcatgactaagggctttatg
gattttttcaacagcgttgatgcggatgttttttgcattcaagaatctaaaatgcaacaa
gaacaaaacacctttgagtttaaagggtattttgatttttggaattgcgcgattaaaaaa
ggctattctggggtggtaactttcactaaaaaagagcctttaagcgtgagctatggtatc
aatatagaagagcatgacaaagaggggcgcgtaataacttgcgaatttgagtccttttat
ttagtgaatgtttatgtccctaattcccaacaagccctatccaggcttagttatcgcatg
agttgggaagtggaatttagaaaatttttaaaagctttagagttaaaaaaacctgtcatt
gtgtgcggggatttgaatgtggcccacaatgaaattgatttagaaaaccctaaaacaaac
cgaaaaaatgcgggctttagcgatgaagagagagagaaatttaacgagcttttgaacgcc
ggttttattgacactttccgttatttttaccctaacaaagaaaaggcttacacctggtgg
agttacatgcaacaagcaagggataaagacattggttggcgcattgattattttctatgc
tctcatcctttaaaaacgcgcttaaaagacgctttaatctataaagatattttagggagc
gatcattgcccggtggggttggaattagtttaa
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