Helicobacter pylori oki898: HPOKI898_07865
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Entry
HPOKI898_07865 CDS
T03729
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hpyj
Helicobacter pylori oki898
Pathway
hpyj03030
DNA replication
hpyj03430
Mismatch repair
hpyj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpyj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPOKI898_07865
03430 Mismatch repair
HPOKI898_07865
03440 Homologous recombination
HPOKI898_07865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpyj03032
]
HPOKI898_07865
03400 DNA repair and recombination proteins [BR:
hpyj03400
]
HPOKI898_07865
Enzymes [BR:
hpyj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPOKI898_07865
DNA replication proteins [BR:
hpyj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPOKI898_07865
DNA repair and recombination proteins [BR:
hpyj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPOKI898_07865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AHN45578
LinkDB
All DBs
Position
complement(1577595..1578458)
Genome browser
AA seq
287 aa
AA seq
DB search
MSDSLLHKDIQALIARLKHQDLSLGMLEKSLSRLIYDEINLEYLKACGLNFIETSENLIT
LKNLKTPLKDEVFSFIDLETTGSCPLKHEILEIGAVQVKGGEIINRFETLVKVKSVPDYI
AELTGITYEDTLNAPSVHEALQELRLFLGNSVFVAHNANFDYNFLGRYFVEKLHCPLLNL
KLCTLDLSKRAILSMRYSLSFLKELLGFGIEVSHRAYADALASYKLFEICLLNLPSYIKT
TMDLIDFSKCANTLIKRPPRARYQETPPPFSLFERTKGLLNIIKATS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagcctcttgcataaagatattcaagccctaatcgctcgcttaaagcaccag
gatttaagcttaggcatgctagaaaaatcgctctctcgccttatttatgatgaaatcaat
ttggaatatttaaaagcatgcgggcttaatttcatagaaacgagcgaaaatttaatcacg
ctcaaaaaccttaaaaccccccttaaagatgaggttttttcctttattgatttagagacc
accggctcttgccccctaaaacatgagattttagaaatcggggccgtgcaagtgaagggg
ggggaaattatcaatcgttttgaaacccttgtgaaagtcaaaagcgtgcctgattatatc
gctgagcttacaggcatcacttatgaagacaccctaaacgccccaagcgtgcatgaagct
ttgcaagaattgcggctttttttaggcaatagcgtgtttgtggcccacaacgctaatttt
gattacaactttttagggcgttattttgtagaaaaattgcattgccccttattgaattta
aagctttgcactttggatttatccaaacgcgctattttatccatgcgttattctttgagc
tttttaaaagagcttttagggtttggtatagaagtcagccatagagcctatgcggacgct
ttagcgagctataagctctttgaaatatgcctgttaaacttgcctagctatatcaaaacc
acaatggatttgattgatttttccaaatgcgctaacaccctaatcaaaagacccccaaga
gccagataccaagaaactccaccgccgttttctctttttgagaggacaaagggtttgtta
aacatcataaaagcaaccagttaa
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