Helicobacter pylori Aklavik86: HPAKL86_00345
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Entry
HPAKL86_00345 CDS
T02353
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hpyk
Helicobacter pylori Aklavik86
Pathway
hpyk03030
DNA replication
hpyk03430
Mismatch repair
hpyk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpyk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPAKL86_00345
03430 Mismatch repair
HPAKL86_00345
03440 Homologous recombination
HPAKL86_00345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpyk03032
]
HPAKL86_00345
03400 DNA repair and recombination proteins [BR:
hpyk03400
]
HPAKL86_00345
Enzymes [BR:
hpyk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPAKL86_00345
DNA replication proteins [BR:
hpyk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPAKL86_00345
DNA repair and recombination proteins [BR:
hpyk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPAKL86_00345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AFX89099
UniProt:
K7Y0T6
LinkDB
All DBs
Position
73088..73951
Genome browser
AA seq
287 aa
AA seq
DB search
MSDSLLHKDIQALIARLKHQDLSLGMLEKSLSRLIYDEVNLEYLKACGLNFVETSENLIT
LKNLKTPLKDEVFSFIDLETTGSCPLKHEILEIGAVQVKGGEIINRFETLVKVKSVPDYI
TELTGIAYEDTLNAPSVHEALQELRLFLGNSVFVAHNANFDYNFLGRYFVEKLHCPLLNL
KLCTLDLSKRAILSMRYSLSFLKELLGFGIEVSHRAYADALASYKLFEICLLNLPSCIKT
TMDLIDFSKCANTLIKRPPRARHQETLAPFPLFERTKGLLNIIKATS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagcctcttgcataaagatattcaagccctaatcgctcgcttaaagcatcag
gatttaagcttaggcatgctagaaaaatcgctctctcgccttatttatgatgaagtcaat
ttggaatatttaaaagcgtgcgggcttaatttcgtagaaacgagcgaaaatttaatcacg
ctcaaaaaccttaaaaccccccttaaagatgaggttttttcttttattgatttagaaacc
accggctcttgccccttaaagcatgagattttagaaatcggagccgtgcaagtgaagggg
ggggaaatcatcaatcgttttgaaacccttgtgaaagtcaaaagcgttcctgattatatc
actgagcttacaggcatcgcttatgaagacaccctaaacgccccaagcgtacatgaagct
ttacaagaattgcgcctttttttaggcaatagcgtgtttgtagcccataacgctaatttt
gattacaactttttagggcgttattttgtagaaaaattgcattgccccttattgaattta
aagctttgcactttggatttatccaaacgggccattttgtccatgcgttattctttgagc
tttttaaaagagcttttagggtttggcatagaagtcagccatagagcctatgcagacgct
ttagcgagctataagctctttgaaatatgcttattaaacttgcccagttgcatcaaaacg
acgatggatttgattgatttttccaaatgcgctaacaccttgatcaaaagacccccaaga
gccagacaccaggagactctagcgccatttcctctttttgagaggacaaagggcttgtta
aatattatcaaagcaaccagttaa
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