Helicobacter pylori Aklavik86: HPAKL86_00845
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Entry
HPAKL86_00845 CDS
T02353
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hpyk
Helicobacter pylori Aklavik86
Pathway
hpyk03030
DNA replication
hpyk03430
Mismatch repair
hpyk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpyk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPAKL86_00845 (dnaE)
03430 Mismatch repair
HPAKL86_00845 (dnaE)
03440 Homologous recombination
HPAKL86_00845 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpyk03032
]
HPAKL86_00845 (dnaE)
03400 DNA repair and recombination proteins [BR:
hpyk03400
]
HPAKL86_00845 (dnaE)
Enzymes [BR:
hpyk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPAKL86_00845 (dnaE)
DNA replication proteins [BR:
hpyk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPAKL86_00845 (dnaE)
DNA repair and recombination proteins [BR:
hpyk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPAKL86_00845 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AFX89195
UniProt:
K7YZN7
LinkDB
All DBs
Position
162153..165788
Genome browser
AA seq
1211 aa
AA seq
DB search
MKENKAFTHLHLHTEYSLLDGANKIKILAKRIKELGMKSVSMTDHGNMFGAIDFYTSMKK
EGIKPIIGMEAYIHNDDNLSSKETKQRFHLCLFAKNQEGYENLMFLSSMAYLEGFYYFPR
INKKLLREHSKGIIASSACLQGEVNYHLNTHNERNRKYGAKGYDEAKKIACEYQEIFEDD
FYLEIMRHGILDQRFIDEQVIKMSLETGLKIIATNDTHYTMPNDAKAQEVAMCVAMGKTL
NDKGRLKHSVHEFYIKSPEEMAKLFADIPEALENTQEIADKCVLEIDLKDDKKNPPTPPS
FKFTKAYAQNEGLSFEDDASYFAYKAREGLKERLVLVPKEKHDQYKERLEKEIEVITSMK
FPGYMLIVWDFIRYAKEMGIPVGPGRGSAAGSLVAFALKITDIDPLKYDLLFERFLNPER
VSMPDIDTDFCQRRRKEIIEYMIEKYGKYNVAQVITFNKMLAKGVIRDVARVLDMPYKEA
DDFAKLIPNRLGITLKGYEKNGEFIEGAWELEPKIKELVESNELAKQVWEYSLNLENLNR
NAGVHAAALVVDSQKELWHKTPLFASEKTGGIVTQYSMKYLEPVDLIKFDFLGLKTLTVI
DDALKIIKTQHKISVDFLSLDMDDPKVYKTIQSGDTVGIFQIESGMFQGLNKRLRPSSFE
DIIAIIALGRPGPMESGMVDDFVNRKHGIEPITYAFKELEPILKPTYGTIVYQEQVMQIV
QTIGGFSLGEADLIRRAMGKKDAQIMADNKAKFVEGAKNLGHDGQKAANLWDLIVKFAGY
GFNKSHSAAYAMITFQTAYLKTYYKHEFMAAMLTSESNKIESVARYIDEVRALEIEVMPP
HINSSMQDFSVAEFKNQKGELEKKIVFGLGAIKGVGGEPIKNIIEERAKGDYKSLEDFIS
RVDFSKLTKKSLEPLVKSGSLDNLGYTRKTMLANLDLICDAGRAKDKANEMMQGGNSLFG
AMDGGTKEQVILDMIDLGEHDAKTLLECEYETLGIHVSGNPLDEFKEEIKGFKNLVKSID
IEELEIGSQAYLLGKIMEVKKKIGKRSGKPYGTADILDRYGKFELMLFEKQLSALEELDI
NKPLVFKCKIEEQEEVARLRLFEILDLESAREVKIPKARYKDHERQKEEVREIPPIEILA
ASSCSLAIVLENDVKKEFLRQIKESALKHQGKRPLYLIIKDKDKQFKIQSDLMVNEKIKD
DFKGLEWRDLA
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagaataaagccttcacgcatttgcacttgcacacggaatattcgcttttagac
ggggcgaacaagattaaaattttagccaaacgcattaaagaattaggcatgaaaagcgtg
agcatgaccgatcatgggaacatgtttggagcgattgatttttatacgagcatgaaaaaa
gaaggcattaagcctatcatcggcatggaagcgtatattcataatgacgacaacctttct
agcaaggaaaccaaacaacgcttccatttgtgcttattcgctaaaaaccaagagggctat
gaaaatttgatgttcttaagctctatggcgtatttagaagggttttattatttcccacgc
atcaataaaaagcttctaagggagcattctaaaggcattatcgcttctagcgcgtgcttg
caaggggaagtcaattaccatttgaatactcataatgagagaaaccgcaaatatggggct
aaaggctatgatgaagccaaaaagatcgcttgcgaataccaagagatttttgaagacgac
ttttatttagaaatcatgcgccatggcattttagatcagcgattcattgatgagcaagtc
attaaaatgtctttagaaacggggttaaaaatcattgccaccaacgacacccactacacc
atgcctaatgatgctaaggctcaagaagtggcgatgtgcgtagcgatgggtaaaacccta
aatgataaggggcgcttgaaacactccgtgcatgagttttacatcaagtcccctgaagaa
atggcaaagctctttgcagatattccagaagctttagaaaacacccaagaaatcgctgat
aaatgcgttttagagattgatttaaaagacgataaaaagaaccctccaacccctccaagc
ttcaaattcactaaagcttacgctcaaaatgaggggctgagttttgaagatgacgcttct
tatttcgcctataaggctagagagggcttgaaagaacgcttagttttagtgcctaaagaa
aaacatgatcaatacaaagagcgcttagaaaaagaaattgaagtcattacgagcatgaaa
ttcccggggtatatgctgattgtgtgggattttatccgttacgctaaagaaatgggcatt
cctgtagggcctggtagggggagcgcggccgggagtttggtggcttttgctttaaaaatc
accgatattgaccccttgaaatacgatttgctctttgaaaggtttttaaaccctgaaaga
gtcagcatgcctgatattgatacggatttttgccagcgccggcgtaaggaaatcatagaa
tacatgattgaaaaatacggcaaatacaatgtggctcaagtcatcacctttaataagatg
ttggctaaaggcgtgatcagagatgtcgcaagggttttggacatgccttataaagaagcc
gatgattttgccaaactcatacctaatcgcttaggcatcacgcttaagggctatgaaaaa
aatggcgagttcatagagggggcgtgggaattagagcctaaaatcaaggaattagtagaa
agcaatgaattagccaaacaagtgtgggagtattcgctcaatttagagaatttgaatcgc
aatgcaggcgtgcatgccgcagccttagtggtggatagccaaaaagagttgtggcacaaa
acccctttgtttgcctctgaaaaaaccggcggtatcgttacgcaatattccatgaagtat
ttagagccggtggatttgattaagtttgactttttggggcttaaaaccttgaccgtgatt
gatgatgcgcttaaaatcattaaaacacagcataaaattagcgtggattttttatcgttg
gatatggacgatccgaaagtgtataaaacgatccaaagtggggatacggtggggatattc
cagattgaatccgggatgtttcaagggcttaacaaacgcttaaggccttcaagctttgaa
gacattatcgccattatcgcgctaggcagaccagggcccatggaatcaggcatggtagat
gattttgtgaacagaaagcatggcattgagcctatcacttatgcgtttaaagaattagag
ccgattttaaagcccacttacggcacgatcgtctatcaagagcaagtgatgcaaatcgtg
caaactatcggcggttttagtttaggtgaagcggatctcatccgccgcgctatggggaaa
aaagacgctcaaatcatggcggacaataaggctaagtttgtagaaggcgctaaaaattta
gggcatgacggccaaaaggcggctaatttgtgggatttgatcgttaaatttgccggctat
ggtttcaacaaatcgcattcggccgcttatgcgatgatcactttccaaacggcgtattta
aagacttattacaagcatgagttcatggcggcgatgcttactagcgaatccaataagatt
gaatccgtggcgcgctatattgatgaggtcagggctttagaaattgaagtgatgccccca
cacatcaattcttctatgcaagatttcagcgtggcggagtttaaaaaccaaaagggcgag
ttagaaaagaagatcgtgtttggtttaggagcgattaaaggggttgggggtgagccgatt
aaaaacatcattgaagaaagggctaaaggggattataagagtttagaagattttatttca
cgggtggatttttctaaactcactaaaaaatctttagagccattagtgaaatcagggagt
ttggataatttaggctacacccgaaaaaccatgctcgctaacttggatctgatctgtgat
gctgggcgcgctaaagacaaggctaatgaaatgatgcaagggggcaactccctttttggg
gcaatggatggcgggacaaaagagcaggttattttagacatgattgatttgggcgaacat
gacgctaaaacgcttttagaatgcgaatacgagactttaggcatccatgtttcaggcaat
cccttagacgagtttaaagaagaaattaagggttttaaaaatttagtcaaaagcattgat
attgaagagttagaaatcggctcgcaagcttatttgctgggtaaaatcatggaagttaaa
aagaaaattggcaaacgaagcggtaagccttatggcacagcggacattttggacagatac
ggcaagtttgaactcatgctgtttgaaaagcaattgagcgctttagaagagttggatatt
aataagcctttagtgtttaaatgcaagattgaagagcaagaagaggtcgcgcgattaagg
ctttttgaaatcttggatctagagagcgctagagaggttaaaatccctaaagcccgctat
aaagaccatgaaaggcaaaaagaagaggtgcgcgaaatcccccccattgaaatactcgcc
gctagttcttgctctttagcgatcgtgttagaaaacgatgtgaaaaaagagtttttaaga
caaatcaaagagagcgctttaaaacaccagggcaaacgccccttgtatttgatcatcaaa
gacaaggataagcaattcaaaatccaaagcgatttaatggtgaatgaaaagattaaggac
gattttaaagggttagagtggagggatttagcttga
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integrated database retrieval system
