Helicobacter pylori Aklavik86: HPAKL86_03415
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Entry
HPAKL86_03415 CDS
T02353
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hpyk
Helicobacter pylori Aklavik86
Brite
KEGG Orthology (KO) [BR:
hpyk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpyk03016
]
HPAKL86_03415 (truD)
Enzymes [BR:
hpyk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HPAKL86_03415 (truD)
Transfer RNA biogenesis [BR:
hpyk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPAKL86_03415 (truD)
Prokaryotic type
HPAKL86_03415 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
GutM
Motif
Other DBs
NCBI-ProteinID:
AFX89693
UniProt:
K7Y9I1
LinkDB
All DBs
Position
complement(704606..705751)
Genome browser
AA seq
381 aa
AA seq
DB search
MNLNFMPLLHAYSHASIDFHFNSSARDFCVHEVPLYEFSNTGEHAVIQVRKSGLNTLEML
QIFSQILGVRIAELGYAGLKDKNALTTQFISLPKKYAPLLEKNTSNFQEKNLKILSLNYH
HNKIKLGHLKGNRFFMRFKKMTPLNAQKTEQVLEQIAQFGMPNYFGPQRFGKFNDNHQEG
LKILQNQTKFAHQKLNAFLISSYQSYLFNALLSKRLEISKIISAFSVKENLEFFKQKNLN
INPNTLKALKNQAHPFKILEGDVMCHYPYGKFFDALELEKESERFLKKEVVPTGLLDGKK
ALYAKNLSLEIEKEFQHNLLSSHAKTLGSRRFFWVFAENITSQYVKEKAQFELGFYLPKG
SYASALLKEIKHEKGENNDEF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaattttatgcccctattgcatgcttatagccatgcgagcattgattttcat
ttcaattctagcgctagggatttttgcgtgcatgaagtgcctttgtatgaatttagcaac
acaggcgaacatgccgttattcaagtgagaaaaagcggtttaaacactttagaaatgctt
caaattttttctcaaattttaggggtaagaatcgctgaattgggttatgcgggcctgaaa
gataaaaacgcgctgacgactcaattcatctcactccctaaaaaatacgcccctttatta
gaaaaaaatacgagcaactttcaagaaaaaaaccttaaaatcctgtctttgaattaccac
cataataaaatcaaattagggcatttgaaagggaatcgcttttttatgcgttttaaaaaa
atgacccccctaaacgctcaaaagactgaacaggttttagaacaaatcgcgcagtttggc
atgcctaattattttggtccgcaacgctttgggaaattcaatgacaaccaccaagagggt
ttaaaaatcttgcaaaatcaaacgaaattcgcccaccaaaaattaaacgcttttttaatt
tcaagctatcaaagttatttgtttaacgcacttttaagcaaacgattagaaatcagtaaa
atcattagcgcttttagcgtcaaagaaaatttagaattttttaaacaaaaaaatttaaat
atcaatccaaacaccctaaaagcccttaaaaaccaagcccacccctttaaaatcttagaa
ggcgatgtgatgtgccattacccttatgggaagttttttgacgctttagaattagaaaaa
gagagcgaaaggtttttgaaaaaagaagttgtgcctaccgggttactagatggcaaaaaa
gctctttatgcaaaaaatttgagtttagaaattgaaaaagaattccagcataacctttta
agtagccatgctaaaacgctaggctctaggcggtttttttgggtgtttgcagaaaatata
acttctcaatatgtgaaagaaaaagcgcaatttgaattgggattttacttgcctaaaggg
agttatgcgagcgcgttgctcaaagaaatcaagcatgagaaaggagaaaataatgacgaa
ttttga
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