Helicobacter pylori Aklavik86: HPAKL86_03620
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Entry
HPAKL86_03620 CDS
T02353
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hpyk
Helicobacter pylori Aklavik86
Brite
KEGG Orthology (KO) [BR:
hpyk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpyk03032
]
HPAKL86_03620
03400 DNA repair and recombination proteins [BR:
hpyk03400
]
HPAKL86_03620
Enzymes [BR:
hpyk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HPAKL86_03620
DNA replication proteins [BR:
hpyk03032
]
Prokaryotic type
DNA Topoisomerases
HPAKL86_03620
DNA repair and recombination proteins [BR:
hpyk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPAKL86_03620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Retrotran_gag_2
Motif
Other DBs
NCBI-ProteinID:
AFX89734
UniProt:
K7Y2A3
LinkDB
All DBs
Position
complement(742172..744658)
Genome browser
AA seq
828 aa
AA seq
DB search
MQDNLINETKNIVEVGIDSSIEESYLAYSMSVIIGRALPDARDGLKPVHRRILYAMHELG
LTSKVAYKKSARIVGDVIGKYHPHGDNAVYDALVRMAQDFSMRLELVDGQGNFGSIDGDN
AAAMRYTEARMTKASEEILRDIDKDTIDFVPNYDDTLKEPDILPSRLPNLLVNGANGIAV
GMATSIPPHRIDEIIDALVHVLENPNARLDEILEFVKGPDFPTGGIIYGKAGIIEAYKTG
RGRVKVRAKVHVEKTKNKEIIVLDEMPFQTNKAKLVEQISDLAREKQIEGISEVRDESDR
EGIRVVIELKRDAMSEIVLNHLYKLTTMETTFSIILLAIYNKEPKIFTLLELLRLFLNHR
KTIIIRRTIFELEKAKARAHILEGYLIALDNIDEIVRLIKTSQSPEAAKNALMERFTLSE
IQSKAILEMRLQRLTGLERDKIKEEYQNLLELIDDLNGILKSEDRLNKVVKTELLEVKEQ
FSSPRRTEIQEVYENIDIEDLIANEPMVVSMSYKGYVKRVDLKAYERQNRGGKGKLSGNT
YEDDFIENFFVANTHDILLFITNKGQLYHLKVYKIPEASRIAMGKAIVNLISLDPDEKIM
ATLSTKDFSDERSIAFFTKNGVVKRTNLSEFGSNRSYSGIRAIVLDEGDELVSAKIVDKD
AKHLLIASYLGLFIKFPLEDVREIGRSTRGVIGIKLNENDFVVGAVVINDDSNKLLSVSE
NGLGKQTLAEAYREQSRGGKGMIGMKLTQKTGNLVSVISVDDENLDLMILTASAKMIRVS
IKDIKETIGRNTSGVKLIDTADKVVYANSCPKEEEPENSENSPTQLFE
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataatttaatcaatgaaacaaaaaatattgtagaagtggggattgattcttct
attgaagagagctatttagcttattcaatgagcgtgatcatagggcgtgctttaccggac
gctagagatggcttaaagcccgtgcataggcgtattttgtatgcgatgcatgaattaggc
ctcacttccaaagtcgcttataaaaaaagcgctaggatcgtgggtgatgtgattggtaaa
taccacccccatggcgataacgcggtttatgatgcgctagtgagaatggcgcaagatttt
tctatgcgtttggaattagtggatgggcaaggcaactttggctctattgatggcgataac
gctgcggcgatgcgttacactgaagccagaatgaccaaagcgagtgaggaaattttaaga
gatattgataaagacaccattgattttgtgcctaattatgatgacaccttaaaagagccc
gatattttaccaagccgtctgcctaaccttttagtcaatggggctaatgggatcgctgta
gggatggcgacttctatcccccctcacaggattgatgaaatcatagacgctttagtgcat
gtcttagaaaaccctaacgccagattagatgaaattttagaatttgtcaaagggcctgat
tttcccactggcgggatcatttatggcaaagcgggcattattgaagcctataaaacgggg
cgagggcgcgtgaaagtgcgcgccaaagtgcatgtggaaaagacgaaaaataaagaaatc
atcgttttagatgaaatgccttttcaaaccaataaagccaaattagtggaacaaatcagc
gatttagcgcgagaaaaacaaattgaaggcattagcgaagtgcgcgatgaaagcgataga
gagggtattagagtggtgattgaattaaaaagagatgcgatgagtgaaattgtcttaaac
cacctctacaaactcaccaccatggagaccacttttagcatcattttactcgctatttac
aataaagagcctaagattttcacgcttttagagttgttgcgccttttcttaaaccacaga
aaaaccattattataagacgcactatttttgaattagaaaaggctaaggctagagcgcat
attttagagggctatttgatcgcattagacaatattgatgaaatcgtgcgactcattaaa
acaagccaaagcccagaagcggctaaaaacgccttaatggagcgttttactttgagcgaa
atccagagcaaagccattttagaaatgcgtttgcagcgcctaacaggccttgaaagagat
aaaatcaaagaagaataccaaaacttgctagagcttattgatgatctcaatggcatttta
aagagcgaagatcgcttgaataaagtcgtcaaaacagagcttttagaagtcaaagagcaa
ttttcttctccaaggcgcactgaaattcaagaagtttatgaaaatattgatatagaagat
ttgatcgctaatgagcctatggtggtgagcatgagctataaaggctatgtgaaaagagtg
gatttaaaagcttatgaaaggcaaaatcgtggcggtaagggcaagctttcaggcaacact
tatgaagacgatttcattgaaaacttttttgtggctaacacgcatgatattttgctcttt
atcaccaacaaggggcagttgtatcatttgaaagtctataagatcccagaagcgagccgg
attgctatgggtaaagccatcgtgaatttaatctcgctcgatcctgatgaaaagatcatg
gcaactctaagcaccaaagactttagcgatgaacgctctatagctttcttcaccaaaaat
ggcgtggtgaagcgcaccaatttgagcgaatttggcagcaataggagttatagcggtatc
agagcgattgttttagatgaaggcgatgaattggtgagcgcaaaaattgtggataaagac
gctaagcatttgctcatcgcatcgtatttgggccttttcattaaattccctttagaagat
gtgcgtgagatcggaagaagcactcgtggggttatagggatcaaactgaatgaaaatgat
tttgttgtcggcgcggtcgttattaacgatgacagcaacaagcttttgagcgtgagtgaa
aacgggcttggcaagcaaactttagccgaagcgtatagagagcaatctcgtggaggtaag
gggatgattggcatgaagctcactcaaaaaaccggcaatctagtgagcgttatcagcgtg
gatgatgaaaacctggatttgatgatccttactgcaagcgcgaaaatgatcagagtttct
attaaagatattaaagaaaccatcggaagaaataccagtggggtaaaactcatagacacc
gccgataaagtcgtgtatgccaattcttgccctaaagaagaagagccagaaaattcagaa
aactctcccacacaattgtttgagtga
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