Helicobacter pylori Aklavik86: HPAKL86_03710
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Entry
HPAKL86_03710 CDS
T02353
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
hpyk
Helicobacter pylori Aklavik86
Pathway
hpyk02020
Two-component system
hpyk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hpyk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HPAKL86_03710
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HPAKL86_03710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpyk03021
]
HPAKL86_03710
Transcription machinery [BR:
hpyk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HPAKL86_03710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
AFX89750
UniProt:
K7Z161
LinkDB
All DBs
Position
764378..765622
Genome browser
AA seq
414 aa
AA seq
DB search
MAVLRANLSPKNKLNATLKGWLPILQSELEDLEEVLKQNALDNPLIKIENKRIKNFSDRF
SAKNSSDHLENFAIASKSLFETLEAQIIPPLFPTETSQKIAMDIINGLNSEGYFEENIEE
RARILGVESEVYEKVRQRFSYLNPAGIGARNVKESFLFQLEGRELDNNELYEEARKIILN
LEKHHEFSKDFYYEKALKILKSFKNPPAIEFLEKEIEVIPELFILEVDNEIIVRLNDESY
PTISLEENRFKDSAYLKEKLKETKDLIDALNLRKATIYKIGLMLLEYQYDFFKGKKLRPL
RLLDLANEFNHSVSTISRAISNKYLACQRGVFPIKHFFSTALDNSETSNAVIKDYLLELI
KNEDKKEPLSDAKILELIEEKFHLKMVRRTITKYRQLLNIASSSERKKLYLMRA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcggttttacgcgcaaatcttagccctaaaaacaaattaaacgctaccttaaaaggg
tggctccccattttacaaagcgagcttgaagatttagaagaagtgttgaaacaaaacgcc
ctagataaccccttaatcaaaattgaaaacaaacgcattaaaaattttagcgatcgtttt
agcgctaaaaatagcagcgatcatttagaaaatttcgcaatcgcatctaaaagccttttt
gaaaccttagaagctcaaatcattccccccctctttcctactgaaacctctcaaaaaatc
gctatggatattatcaacgggctaaatagtgaagggtattttgaagaaaacattgaagaa
agggctagaattttaggggtagagagcgaagtttatgaaaaagtgcgccagcgtttcagt
taccttaatcccgctggcattggcgctagaaatgtgaaagagagctttttattccagcta
gagggtagggaattagacaataacgagctttatgaagaagcgcgaaaaatcattttaaac
ttagaaaaacaccatgaattttctaaagatttttattatgaaaaggctttaaagatttta
aaatcctttaaaaaccccccggccattgagtttttagaaaaagaaatagaagtcattccg
gagctttttattctagaagtggataatgaaatcatcgtgcgtttgaatgatgagagctac
ccaacgatcagtttagaagaaaatcgctttaaagatagtgcttatttaaaagaaaaatta
aaagagactaaagatttgattgatgcattaaatttgagaaaagccacgatttataaaatc
ggtctcatgctcttagagtatcaatacgatttttttaagggtaaaaaattgcgcccttta
agattattggatttagccaatgagtttaaccactctgtaagcacgatttcaagggctatt
tctaataaatatttggcatgccaaaggggggttttccctattaaacatttctttagcacc
gccttagacaatagcgagacttcaaacgctgtgattaaagactaccttttagaattgatc
aaaaacgaagacaaaaaagagcctttgagcgacgctaagattttagaactcattgaagaa
aaattccatttgaaaatggtaagaagaacgatcaccaaataccgccaactgctcaacatc
gcttcttcaagcgaaaggaaaaagctctatttgatgcgcgcttga
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