Helicobacter pylori Aklavik86: HPAKL86_04190
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Entry
HPAKL86_04190 CDS
T02353
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
hpyk
Helicobacter pylori Aklavik86
Pathway
hpyk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hpyk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HPAKL86_04190 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hpyk01007
]
HPAKL86_04190 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpyk03016
]
HPAKL86_04190 (aspS)
03029 Mitochondrial biogenesis [BR:
hpyk03029
]
HPAKL86_04190 (aspS)
Enzymes [BR:
hpyk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
HPAKL86_04190 (aspS)
Amino acid related enzymes [BR:
hpyk01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HPAKL86_04190 (aspS)
Transfer RNA biogenesis [BR:
hpyk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HPAKL86_04190 (aspS)
Prokaryotic type
Other AARSs
HPAKL86_04190 (aspS)
Mitochondrial biogenesis [BR:
hpyk03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HPAKL86_04190 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
DUF1967
Motif
Other DBs
NCBI-ProteinID:
AFX89844
UniProt:
K7Y2H6
LinkDB
All DBs
Position
867778..869511
Genome browser
AA seq
577 aa
AA seq
DB search
MRSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKAL
EVRSEFVLVAKGKTRLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEIGNKNVNEDL
RLKYRYLDLRSLSAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS
RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFTQIDAEMSFCS
ENDVMGVVEDLLQEIFKAIGHNISKPFKRMPYKEAMENYGSDKPDLRFGLPLIEVGDCFM
DSSNAIFSNIAQDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAQGLAYLQIKEDG
IKGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAETLDLIDKD
ALNFLWVVNFPMFEKTENGYHAAHHPFTMPKNIECKDLEEIEAHAYDVVLNGVELGGGSI
RIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSSSI
RDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagtcatttctgtgcagaaattagtgaaaaagatgtgggtaaaaccatcaaagtg
gccgggtggtgtaacacttatagagaccatggaggcgtggtttttattgatttaagggat
aaaagcggtttagtgcaattagtctgtgatcctagctctaaggcttatgaaaaggcttta
gaagttaggagtgaatttgtgctagtggctaaaggaaaaacgcgtttaagagggcccggt
ttagaaaaccctaaactaaagaccggtaaaattgaaattgttttagaagagttagtcatt
gaaaataaaagcgctaccccaccgattgaaattggcaataaaaatgtgaatgaagatttg
cgcttgaaataccgctatttggatttgcgctctttgagtgcttatgaaatctttaaattg
cgcagcgaagtggctttaatcgctcgtaacgctttagcccaaaagggctttttagagatt
gaaacccccattttgtctaaaaccacgcctgagggggctagggattatttagtgccaagc
agggtgcatgagggcgaatttttcgcgctccctcaaagcccgcaattgttcaaacagctt
ttaatggtggggggaatggataggtattttcaaatcgctcgttgctttagagatgaagat
ttgagagcggacaggcagccagaattcacgcaaattgatgcggaaatgagtttttgtagc
gaaaatgatgtgatgggcgtggtggaagatttgttgcaagagatttttaaagcgattggg
cataatatttctaaaccttttaaacgcatgccctataaggaagcgatggaaaattacggg
agcgataagccggatttacgctttggattgcctttaatagaagtgggggattgttttatg
gacagctcaaacgctattttttctaatatcgcgcaagatcctaaaaacaaacgcattaaa
gctttgaatgttaagggggctgatgcactttttagccgcagcgttttaaaggaattagaa
gaatttgtgcgccaatttggggctcaaggcttggcgtatttgcaaattaaagaagatggg
attaaagggcctttagttaaatttttaagcgaaaaggggcttaaaaatattttagaaaaa
actggtgcaaaaaccggggatattgtcttttttggagccggggataaaaaaatcgtgtta
gattacatggggcgtttgcgcttgaaggtggcggaaacgcttgatttgattgataaagac
gctttgaatttcttatgggtagtcaatttccccatgtttgaaaaaaccgaaaacggctat
catgctgcgcaccacccttttacgatgcctaaaaatatagaatgcaaagatttagaagag
attgaagcgcatgcgtatgatgtggtgcttaatggcgtggagcttggtggggggagcatt
aggattcataaagaagaaatgcaaaaaaaagtctttgaaaaaatcaatattaacgaagag
gaagcgcaaaagaaatttggctttttactggaagcgctaaagtttggcgctcctcctcat
gggggctttgcgataggctttgatcgcttgatcatgctaatgactaaatccagtagcatt
agagatgtgatcgctttccctaaaacgcaaaaagcttcatgtttattgactgacgctcct
agccccattaatgaagagcaactaagagaattacacattcgcttaagaaaataa
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