Helicobacter pylori Aklavik86: HPAKL86_06570
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Entry
HPAKL86_06570 CDS
T02353
Name
(GenBank) ATP-binding protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
hpyk
Helicobacter pylori Aklavik86
Pathway
hpyk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpyk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPAKL86_06570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpyk03019
]
HPAKL86_06570
Messenger RNA biogenesis [BR:
hpyk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HPAKL86_06570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
RMMBL
RNase_J_C
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
AFX90301
UniProt:
K7Y9D6
LinkDB
All DBs
Position
1376618..1378702
Genome browser
AA seq
694 aa
AA seq
DB search
MTDNNHYENNEINENSSENSKAHHGMRAGAFERFTNRKKRFRENAQKNAESSNHEAPSHH
KKERHPNKKPNHHHKAKHTPQKTRNYAQEELDNNKVEGVTEILHVNERGTLGFHKELKKG
VEANNKIQVEHLNPHYKMNLNSKASVKITPLGGLGEIGGNMMVIETPKSAIVIDAGMSFP
KEGLFGVDILIPDFSYLHQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGL
IGSKFDEHGLKKYRSYFKIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHT
GDFKIDHTPVDNLPTDLYRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDRLFKE
AQGRVIMSTFSSNIHRVYQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIE
ANEVAKYPDNEVLIVTTGSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASV
SAVLNFLIKKEAKVAYQEFDNIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQ
TAISCGVPEKNIYLMEDGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEV
ASAGVFAATIFVSKNKQALLESSQFSSLGLVGFKDEKPLMKEIQGGLELLLKSSNAEILN
NPKKLEDHTRNFIRKALFKKFRKYPAIICHVHAT
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgactgataacaaccattatgaaaataatgaaatcaatgaaaacagcagtgaaaattca
aaagctcatcatgggatgcgagccggagcgtttgagcgattcaccaaccgcaaaaagcgt
tttagagaaaacgcgcaaaaaaacgcagagtcttcaaaccatgaagcgccttcacaccat
aaaaaagagcgccaccccaacaaaaaaccaaaccaccaccacaaagctaaacacaccccc
caaaagaccagaaattacgcccaagaagaattggataacaacaaagtagagggcgttacg
gaaattttgcatgtgaatgagagagggactttaggctttcataaggagctaaaaaagggc
gttgaagcgaataacaagatccaggtggagcatttaaacccgcattataagatgaatcta
aactctaaagcgagcgttaaaatcacgcctttagggggattgggcgagattggggggaac
atgatggtcattgaaaccccaaaaagcgcgatcgtgattgatgcgggcatgagcttccct
aaagagggactatttggcgtggatattttaatcccggatttttcctacttgcaccaaatc
aaggacaaaatcgctggcattatcatcacccatgcccatgaagatcacataggggccacg
ccttatttgtttaaagagttgcaattccccctttatggcacgcccttgagtttggggctg
attgggagcaagtttgatgaacatggtttgaaaaaataccgctcgtattttaaaatcgta
gaaaagcgctgtcctattagcgtgggcgaatttatcattgaatggattcacatcacgcat
tccattattgacagcagcgctttagcgatccaaactaaagccggaacgatcattcacacc
ggcgactttaaaatcgatcacaccccggtggataatctgcctactgatttgtatcgttta
gcgcactatggcgaaaaaggggtgatgcttcttttaagcgattccactaactcccataaa
tccgggaccacaccgagtgaaagcaccatagcgccggcttttgataggctttttaaagaa
gcgcaagggagggtgattatgagcacattctctagcaatatccaccgggtgtatcaagcc
atacaatacggcattaaatacaaccgcaagatcgctgtgatcgggcgctctatggaaaaa
aacctagacatcgctagagaattaggctatatccatttgccttatcaatcttttattgaa
gccaatgaagtcgctaaatacccggataatgaagtcttaatcgtaacgaccggatcacaa
ggcgaaaccatgagcgcgctttatcgcatggcgactgatgaacaccgccacatttctatc
aaacccaacgatttagtcatcatctccgctaaagccattcctggcaatgaagcgagcgtt
tcagcggtattgaattttttaatcaaaaaagaagctaaagtggcttatcaagaatttgat
aatatccatgtgagcgggcatgctgcccaagaagagcaaaagctcatgttaagactcatc
aagcctaagtttttcttacccgtgcatggggaatataaccatgtcgcgcgccacaagcaa
accgctatttcttgcggggtgcctgaaaaaaatatctatttaatggaagatggcgatcaa
gtggaagttggccctgcgttcattaaaaaagtgggcacaattaaaagcggtaaaagctat
gtggataaccaaagcaatttgagtattgacacaagcattgtgcaacaaagagaagaagtc
gctagcgctggggtgtttgccgctacgatttttgtgagtaaaaacaaacaagcgctttta
gaaagctctcaattttctagtttggggcttgtgggctttaaagatgaaaagcctttgatg
aaagaaattcaagggggattagagttgttattgaaatctagcaacgccgaaattttgaat
aaccctaaaaaattagaagatcacacccgtaatttcatcagaaaagcgctctttaaaaag
tttagaaaatacccggctatcatttgtcatgtccatgccacttga
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