Helicobacter pylori OK310: HPOK310_0007
Help
Entry
HPOK310_0007 CDS
T02542
Symbol
hopZ
Name
(GenBank) outer membrane protein BabA
KO
K15845
outer membrane protein HopZ
Organism
hpyl
Helicobacter pylori OK310
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SabA_adhesion
HP_OMP
EspB_PPE
DUF6734
DUF6331
Motif
Other DBs
NCBI-ProteinID:
BAM97435
LinkDB
All DBs
Position
complement(5246..7258)
Genome browser
AA seq
670 aa
AA seq
DB search
MGYQIGEAAQMVKNTGELKRLSDTYENLSNLLNNFNNLNQAVTNASSPSAINAAIDNLKA
NTQGLIGEKDNSPAYQAVSLALNATVGLWNVIGYAIMCGNGNGTGSGPGSVVFNNQPGSY
TTSITCNRYEATGPGKSMSIQEFEKLNKAYQAIQQALKEQKGFPVLDNNGTGVTVSYTYE
CKQTSTINGGVNQFCNKNGSSNGGSDNKETQTFQFTNNAQNLLAQAADIMNVLNTQCPLV
RSTHDENAPGNGSPWGISKSGNACQIFSQEFSAVTSMIKNAQEIVTQAQTLNANQQNNQN
APQDFNPYTSSDRAFAQNMLNHAQAQAKMLELVDQIKTNLSTIPEKFTKDYLAACKNGGG
TLPNAGVTSNTWGAGCAYVEETITALNNSLAHFGTQAEQIKQSELLARTILDFRGSLSNL
NNTYNSITTTASNTPNSPFLKNLISQSTNPNNPEGLKTVYQLNQSAYSQLLSATQELGHN
PFRRIGLISSQTNNGAMNGIGVQIGYKQFFGEKRRWGARYYGFFDYNHAYIKSSFFNSAS
DVFTYGVGTDVLYNFINDKATKNSKISFGVFGGVALAGTSWLNSQYVNLATFNNFYSAKM
NVANFQFLFNLGLRMNLAKNKKKASDHVAQHGVELGVKIPTINTNYYSLLGTQLQYRRLY
SVYLNYVFAY
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
gtgggctatcaaatcggtgaagccgctcaaatggtgaaaaacaccggcgaattgaaaagg
ctttcagacacttatgaaaatttgagcaatcttttaaacaattttaacaatctcaatcag
gcggtaacgaatgcgagtagcccttcggcaatcaatgctgcgatcgataatttaaaagca
aacacgcagggtttgattggcgaaaaagacaattccccggcgtatcaagccgtctcttta
gcgctcaatgcgacggtaggcttgtggaatgtcatcggctatgcgatcatgtgcgggaat
gggaacggcacagggagtgggcctggcagcgtggtctttaataaccaaccaggaagctac
acaacgagcattacttgcaaccggtatgaagcgactggtcctggtaaatccatgtctatc
caagaatttgaaaaactcaataaagcctatcaagctatccaacaagctttaaaggaacaa
aagggttttcctgtcttagacaacaacggcacaggagtgaccgtaagttacacatatgaa
tgcaaacaaactagtactatcaacggcggtgtgaatcaattctgtaataaaaatggtagc
agtaatggtggtagcgacaacaaagaaacacaaacctttcaattcaccaataacgctcaa
aatcttttagctcaagcagcagatatcatgaatgtccttaacacgcaatgccctttagtg
cgatctacgcatgatgaaaacgctccgggtaatggtagcccatggggtatcagtaaaagt
gggaatgcgtgccaaatcttttcacaagaatttagcgcggttaccagcatgatcaaaaac
gcccaagaaatcgtaacgcaagctcaaacccttaacgctaaccagcaaaacaatcaaaac
gcgccacaagatttcaatccttacacctcttctgatagggctttcgctcaaaacatgctc
aatcacgcgcaagcgcaagccaagatgcttgaactagtcgatcaaatcaaaaccaatctc
agcactatcccagaaaaatttaccaaagactacttggcagcttgcaaaaatgggggtgga
acattacctaatgcaggggttacttctaacacttggggagccggttgtgcctatgtagaa
gagacgataacggctttaaataacagccttgcgcattttggcactcaagcagagcaaata
aagcaatctgagttgcttgcacgcactatacttgattttagaggcagccttagcaattta
aacaacacttataacagcatcaccacgaccgcttcaaacacgcctaattccccattcctt
aaaaatttgataagccaatccactaaccctaataaccccgagggtttaaagaccgtttat
caactcaaccaaagcgcttattcgcaattattaagcgccacgcaagaattagggcataat
cctttcagacgcattggattaatcagctctcaaaccaacaacggcgcgatgaatgggatc
ggtgtgcaaatagggtataaacaattttttggtgaaaagagaaggtggggcgctagatat
tacggcttttttgattacaaccatgcttatatcaaatccagctttttcaattcagcctct
gatgtgttcacttatggggtaggaacagatgtcctctataactttatcaatgataaagcc
accaaaaacagcaagatttcttttggggtgtttgggggtgtcgccttagccggcacttcg
tggcttaattctcaatatgtgaatttagcgacattcaataatttctatagcgctaaaatg
aatgtggcgaatttccaattcttattcaacttgggcttgaggatgaacctcgctaaaaat
aagaaaaaagcgagcgatcatgtagctcagcatggcgtggaactaggcgtgaagatcccc
acgatcaacaccaattactattctttgctaggcactcaactccaataccgcaggctttat
agcgtgtatctcaactatgtgtttgcgtattga
DBGET
integrated database retrieval system
