Helicobacter pylori OK310: HPOK310_0054
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Entry
HPOK310_0054 CDS
T02542
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hpyl
Helicobacter pylori OK310
Pathway
hpyl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPOK310_0054 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpyl03400
]
HPOK310_0054 (ung)
Enzymes [BR:
hpyl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HPOK310_0054 (ung)
DNA repair and recombination proteins [BR:
hpyl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPOK310_0054 (ung)
Prokaryotic type
HPOK310_0054 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAM97482
LinkDB
All DBs
Position
55394..56095
Genome browser
AA seq
233 aa
AA seq
DB search
MKLFDCAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKSPKTIFPKSSNLFYALNLTPPS
AVKIILLGQDPYHSTYLENQQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANLGVPVPC
CGDLSAWAKRGMLLLNAILSVEKNQAASHKRIGWEAFSDQILMRLFEANTPLIVVLLGKI
AQKKIALIPKNKHIIITAPHPSPLSRGFLGSGVFTSVQNAYREVYHKDFDFSL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttttgactgcgctcctttaagtttggcttggcgggagtttttgcaaagcgaa
tttaaaaagccttattttttagaaatagaaaaacgctacttagaggctctaaaaagccct
aaaaccattttccctaaaagctctaatctgttttatgcgctcaatctaacaccccctagt
gcggttaaaatcattcttttagggcaagatccctaccattccacctacctagaaaatcaa
caagaattgcctgtggcgatgggcttaagctttagcgtggaaaaaaatgcccccattcct
ccaagcttaaaaaatatttttaaagaattgcatgcgaatttaggcgtgcctgtgccttgt
tgtggggatttgagcgcgtgggctaaaaggggcatgctgttattgaacgccattttaagc
gtggaaaaaaaccaagccgcttcgcacaaacgcatcggttgggaagcttttagcgatcaa
atattgatgcgcctttttgaagccaacacccccttgatcgtggtattattaggaaagatc
gcgcaaaaaaagatcgctctaatccccaaaaacaaacacatcatcattaccgctcctcac
cctagcccattatctagggggtttttagggagtggggtttttacaagcgttcaaaacgct
tatagagaggtttatcataaggattttgattttagtttatga
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