Helicobacter pylori OK310: HPOK310_0127
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Entry
HPOK310_0127 CDS
T02542
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hpyl
Helicobacter pylori OK310
Brite
KEGG Orthology (KO) [BR:
hpyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpyl03032
]
HPOK310_0127 (topA)
03400 DNA repair and recombination proteins [BR:
hpyl03400
]
HPOK310_0127 (topA)
Enzymes [BR:
hpyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HPOK310_0127 (topA)
DNA replication proteins [BR:
hpyl03032
]
Prokaryotic type
DNA Topoisomerases
HPOK310_0127 (topA)
DNA repair and recombination proteins [BR:
hpyl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPOK310_0127 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF1272
Zn_ribbon_LysW
DUF7575
Motif
Other DBs
NCBI-ProteinID:
BAM97555
LinkDB
All DBs
Position
131171..133381
Genome browser
AA seq
736 aa
AA seq
DB search
MKHLIIVESPAKAKTIKNFLDKNYEVIASKGHVRDLSKFALGIKIDETGFTPNYVVDKDH
KELVKQIIELSKKASTTYIATDEDREGEAIGYHVACLIGGKLENYPRIVFHEITQNAILN
ALKTPRQIDMSKVNAQQARRFLDRIVGFKLSSLISSKITKGLSAGRVQSAALKLVIDKER
EIKAFKPLTYFTLDAYFEPHLEAQLISYKGNKLKAQELIDKKEAQEIKNELEKESYTISS
IIKKSKKSPTPPPFMTSTLQQSASSLLGFSPTKTMSIAQKLYEGVATPQGVMGVITYMRT
DSLNIAKEALEEARNKILKDYGKDYLPPKAKVYSSKNKNAQEAHEAIRPTSIILEPNALK
DYLKPEELKLYTLIYKRFLASQMQDALFESQSVVVACEKGEFKSSGRKLLFDGYYKILGN
DDKDKLLPNLKENDPIKLEKLESNAHVTEPPARYSEASLIKVLESLGIGRPSTYAPTISL
LQNRDYIKVEKKQISALESAFKVIEILEKHFEEIVDSKFSASLEEELDNIAQNKADYQQV
LKDFYYPFMDKIEAGKKNIISQKVHEKTGQSCPKCGGELVKKNSRYGEFIACNNYPKCKY
VKQTENTNDGFKQELCEKCGGEMVQKFSRNGAFLACNNYPECKNTKSLKNTPNANEIIEG
VKCPECGGDIALKRSKKGSFYGCNNYPKCRFLSNHKPINKRCEKCHYLMSERIYRKKKAH
ECIQCKECVFLEEDDG
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaccttattattgtagaatcccccgcaaaagccaaaaccattaaaaattttttg
gataaaaattacgaagtcatcgcctctaaggggcatgttagggatttatccaaattcgct
ttaggtattaagattgatgaaacaggcttcactcctaattatgtcgtggataaagaccat
aaagagcttgtcaaacagatcatagagctttctaaaaaggcatctaccacctacatcgct
accgatgaagacagagaaggggaagcgataggctatcatgtggcgtgcttgattgggggg
aaattagagaactatcctagaatcgtttttcatgagatcacgcaaaatgcgattttaaac
gctctaaaaaccccacgacaaattgacatgtcaaaggtcaatgcccaacaagccagacgc
tttttggatcggatcgtggggtttaagctcagctcgttgatttcatcaaaaatcactaaa
ggtttgagcgctgggcgggtgcaaagcgcagctttaaagcttgtgattgataaagagaga
gagatcaaagcctttaagcctttaacctacttcacgctagacgcttattttgagccgcat
ttagaagcgcagctcattagctataagggcaacaaactcaaagcccaagagcttattgat
aaaaaagaagctcaagagattaaaaacgaattagaaaaagaaagctacactatttctagt
attattaaaaaatctaaaaaatcccccacaccgccccctttcatgacttctactttacag
caaagcgcttccagtcttttaggcttttcgcccacaaaaaccatgagtatcgctcaaaaa
ttgtatgagggcgtagccacaccgcaaggggttatgggggtgatcacttacatgaggacc
gatagcttgaatatcgctaaagaagctttagaagaagcaaggaataagatcttaaaagac
tatggcaaagactacttaccccctaaagccaaagtctattccagcaagaataaaaacgcc
caagaagcccatgaagcgatcaggcccacttctattattttagagccaaacgctttaaaa
gactaccttaagcctgaagaattaaagctctataccttaatttacaaacgcttcttagct
tctcaaatgcaagacgctctttttgaaagccaaagcgtggttgtggcttgcgaaaaaggc
gagtttaaatctagtggcagaaaactcctttttgatggctattataaaattttaggcaat
gacgataaggacaaattgctccccaatttgaaagaaaacgaccccattaaattagaaaaa
ctagagagcaacgcccatgttacagaacctccagcacgctattcagaagcgagcttgatt
aaagttttagaaagtttaggcataggcaggcctagcacctacgccccaacgatttccctc
ttacaaaacagagactacatcaaggtagaaaaaaagcaaatcagcgctttagagagcgct
tttaaggtgatagaaattttagaaaagcattttgaagaaatcgtggattccaaattcagc
gcttctttagaagaggaactagacaatatcgctcaaaataaagccgactatcagcaagtc
ttaaaggacttttactacccttttatggataaaattgaagctgggaaaaagaatatcatc
tctcaaaaagtgcatgaaaaaaccggccaatcatgccctaaatgcggtggggaattagtc
aaaaaaaatagccgttatggggagtttatcgcttgcaacaattaccctaaatgcaaatat
gtcaaacaaactgaaaacaccaatgatggatttaagcaagaattgtgcgaaaaatgcgga
ggggaaatggtgcaaaaattcagcagaaacggggcgtttttagcttgcaacaactaccct
gaatgcaaaaacaccaaatcgttaaaaaacacccctaacgcaaatgaaataatagaaggc
gtgaaatgcccagaatgcggaggggatattgccttaaaaaggagtaagaaaggctcgttt
tatggctgcaacaattaccctaaatgccgttttttatccaaccataagcccattaataag
cgttgtgaaaaatgccattatttgatgagtgaaagaatctatcgcaaaaaaaaggctcat
gaatgcatccaatgcaaagagtgcgtgtttttagaggaagatgatggctaa
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