Helicobacter pylori OK310: HPOK310_0189
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Entry
HPOK310_0189 CDS
T02542
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hpyl
Helicobacter pylori OK310
Pathway
hpyl00260
Glycine, serine and threonine metabolism
hpyl00460
Cyanoamino acid metabolism
hpyl00630
Glyoxylate and dicarboxylate metabolism
hpyl00670
One carbon pool by folate
hpyl00680
Methane metabolism
hpyl01100
Metabolic pathways
hpyl01110
Biosynthesis of secondary metabolites
hpyl01120
Microbial metabolism in diverse environments
hpyl01200
Carbon metabolism
hpyl01230
Biosynthesis of amino acids
hpyl01240
Biosynthesis of cofactors
hpyl04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hpyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HPOK310_0189 (glyA)
09102 Energy metabolism
00680 Methane metabolism
HPOK310_0189 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HPOK310_0189 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HPOK310_0189 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HPOK310_0189 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HPOK310_0189 (glyA)
Enzymes [BR:
hpyl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HPOK310_0189 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
HrcA
Motif
Other DBs
NCBI-ProteinID:
BAM97617
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Position
192300..193550
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AA seq
416 aa
AA seq
DB search
MAYFLEQTDSEIFDLIFEEYKRQNEHLEMIASENYTFASVMEAMGSVLTNKYAEGYPNKR
YYGGCEVVDKIESLAIERAKKLFNCQFANVQAHSGSQANNAVYHALLKPYDKILGMDLSC
GGHLTHGAKVSLTGKHYQSFSYGVNLDGYIDYEEALKIAQSVKPEIIVCGFSAYPREIDF
KKFREIADEAGALLLGDIAHVAGLVVTGEHAHPFPHCHVVSSTTHKTLRGPRGGLILTND
EEIAAKIDKAIFPGTQGGPLMHAIAAKAVGFKENLKPEFKAYAQLVKSNMQVLAKALQEK
NHKLVSGGTSNHLLLMDFLDKPYSGKDADIALGNAGITVNKNTIPGETRSPFVTSGIRIG
SAALSARGMGAREFEIIGNKISDILNDINNISLQLHVKEELKAMASQFPVYQQPIF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattttttagaacaaacggatagtgaaatttttgatctcatctttgaagaatac
aagcggcaaaatgagcatttagaaatgatagcgagcgagaattacacttttgcaagcgtt
atggaggctatggggagtgttttaacgaataaatacgctgaaggctatcctaacaagcgc
tactatggaggctgtgaagtggtggataaaatagaaagcttagccatagaaagggctaaa
aagctttttaattgccagttcgctaatgtgcaagcgcactcaggctcacaagccaataac
gctgtctatcacgctcttttaaagccttatgacaagattttgggcatggatttaagctgt
ggagggcatttaacgcatggcgctaaagtgagcttaaccggcaagcattatcagagcttt
tcttatggtgtgaatttagatggctatattgattatgaagaagcgctaaaaatcgctcaa
agcgttaagccagaaatcattgtgtgcgggttttcagcctatccaagggagattgatttt
aagaaatttagagaaatcgctgatgaagcgggggcgttactattgggcgatatagcccat
gtggcagggcttgtggtaaccggtgagcatgctcatcctttcccgcattgccatgtggtt
tcaagcaccactcataagaccttaagaggacctagaggggggcttattttaaccaatgat
gaagagatagcggctaagattgataaagcgatttttccaggaactcaaggcgggcctttg
atgcatgcaattgctgctaaagcggtggggtttaaagagaatctaaaaccagaatttaaa
gcttatgcgcaattagtgaaatctaacatgcaagttctcgctaaagcgctacaagaaaaa
aaccataagttggtgagtggtggcacttctaaccatttgcttttaatggatttcttagat
aagccttatagtgggaaagacgctgatattgcattagggaatgccggaatcaccgtgaat
aaaaacaccattcctggcgaaacgcgcagcccttttgtaacgagcgggataaggattggc
tcagcggcattgagcgcaaggggcatgggagctagagaatttgaaatcatagggaataaa
atatcagatattttgaatgatattaataatattagtttgcaattgcatgtgaaagaagaa
ttgaaggctatggctagtcaattccctgtgtatcaacaacctattttttaa
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