Helicobacter pylori OK310: HPOK310_0234
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Entry
HPOK310_0234 CDS
T02542
Symbol
hopA
Name
(GenBank) outer membrane protein HopA
Organism
hpyl
Helicobacter pylori OK310
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HP_OMP
SabA_adhesion
DUF763
Peptidase_M32
Med11
Motif
Other DBs
NCBI-ProteinID:
BAM97662
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Position
complement(241531..242997)
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AA seq
488 aa
AA seq
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MKKTILLSLMASSLLAEDDGVFMSVGYQIGEAAQMVKNTGEIQKVSNAYENLNNLLTRYN
ELKQTASNTNSSTAQAIDNLKESANRLKTTPNSANQAVSSALSSAVAMWQVIASNLANGT
LPTNEYEKINTISQSLQNTLENKNTANNNTTIENDYDQLLTQASTIISTLQSQCPGIDGG
NGKPWGINASGNACNIFGNTFNAITSMIDSAKKAAAESRRTNDPSQNTNQQSAFTNADFN
KNLKEVSSVINDTISYLKGENLATIYNTLQKTPGSKGFQSLVSRSSYSYSLNETQYSEFQ
TTTKEFGNNPFRSVGLINSQSNNGAMNGVGVQLGYKQFFGKNKFFGIRYYAFFDYNHAYI
KSNFFNSASNVFTYGAGSDLLLNFINGGSDKNRKVSFGIFGGIALAGTTWLNSQFVNLKT
TTSIYNAKINNTNFQFLFNTGLRLQGIHHGVELGVKIPTINTNYYSFMGAKLAYRRLYSV
YFNYVLAY
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacgattttactttctcttatggcgtcatcgcttcttgctgaagatgacggc
gtttttatgagcgtgggctatcaaatcggcgaagccgctcaaatggtgaaaaacaccggt
gaaatccaaaaagtctccaacgcttacgaaaatttgaacaatcttttaacccgctataac
gagctcaaacaaacggcctctaacaccaactcaagcaccgctcaagcgattgacaatcta
aaagagagcgctaacagattaaaaacgacccctaatagcgccaatcaagccgtatcttca
gcgctcagctctgcggtagccatgtggcaagtgatagcctctaatttagccaatggcacg
ctacccactaatgaatacgaaaaaatcaatacgatttctcaatcgctccaaaatacatta
gaaaataaaaatacagccaacaataataccacaattgaaaatgactatgaccagctttta
actcaagctagcaccattattagcacccttcaaagccaatgcccggggatagatgggggc
aatggcaaaccatggggcattaatgcaagcgggaacgcatgcaatatttttggcaacaca
ttcaacgccatcactagcatgattgatagcgctaaaaaagccgccgcagaatcccgaaga
accaacgacccaagccaaaacacaaaccaacaaagtgcatttaccaacgctgattttaat
aaaaaccttaaagaagtatcaagcgttattaatgatacgatctcttacctcaaaggggag
aatttagcaaccatctataacacccttcaaaaaacgcccggttctaaagggtttcaaagt
ttggtgagcagatctagctatagttattctctcaatgaaacccaatattctgaattccaa
actaccaccaaagagtttggcaacaacccttttagaagcgtgggattgattaactctcaa
agcaataacggggcgatgaatggcgtgggcgtgcaattaggctataagcaattttttggg
aaaaataaattttttgggatccggtattatgccttttttgattacaaccatgcctatatc
aaatccaacttttttaactccgcttctaatgttttcacttatggcgcaggcagcgatctt
ttattgaatttcatcaatggcggatccgataaaaaccgcaaagtctcttttggcattttt
ggaggcatcgctctagccggcacgacatggctcaattcccaatttgtgaatttaaaaacc
accactagcatctacaacgctaaaatcaacaacaccaatttccaattcttattcaatacc
ggtttaaggcttcaagggattcaccatggcgttgaattaggcgtgaaaatccccaccatc
aacacgaattactattctttcatgggcgctaaattagcataccgaagactttatagcgtg
tatttcaattatgttttggcctattga
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