Helicobacter pylori OK310: HPOK310_0296
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Entry
HPOK310_0296 CDS
T02542
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
hpyl
Helicobacter pylori OK310
Pathway
hpyl00300
Lysine biosynthesis
hpyl00470
D-Amino acid metabolism
hpyl01100
Metabolic pathways
hpyl01110
Biosynthesis of secondary metabolites
hpyl01120
Microbial metabolism in diverse environments
hpyl01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hpyl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HPOK310_0296 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPOK310_0296 (lysA)
Enzymes [BR:
hpyl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HPOK310_0296 (lysA)
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Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
BAM97724
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Position
309694..310911
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AA seq
405 aa
AA seq
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MFNYEELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLANL
ESGADCVSIGEIYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELQTIE
KIAQSLGIKARVSIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPI
SVHFHIGSQLLDLEPIIEASQKVAKIAKSLIALGVDLRFFDVGGGIGVSYENEETIKLYD
YAQRILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPS
LYDAKHAIRVITPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGS
SMASQYNSRPKLLELALEDHKIRVIRRREALEDLWRLEEEGLKGV
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtttaattatgaagagctgtttcaaactcacaaaacccctttttacctctatgatttt
gacaaaatcaaacaggcttttttgaattataaagaagcgtttaaggggcgtaaatctttg
atttgctacgctttaaaggcgaattccaatttgagtatcctctctttattagccaattta
gagagcggggcagattgcgtttccataggcgagatatatagggctttaaaggctgggatc
aagccttataggatcgtgtttagcggggtgggtaagagcggatttgaaatagagcaagcc
ctaaaactcaacattttatttttgaatgtagaaagttttatggaattgcaaacgattgaa
aaaatcgcccaatctttagggataaaggctagggtctctattaggatcaaccctaacatt
gacgctaaaacgcacccctatatttctaccggtttgaaagaaaataagtttggcgtggga
gaaaaagaagctttagaaatgtttctttgggctaaaaaaagcgcatttttagagcctatt
agcgtgcattttcatatcggctcacagcttttagatttagagccgattatagaagcgagc
caaaaggtggctaaaatcgctaaatctttgatagcgctaggggtagatttgcgttttttt
gatgtgggcggagggattggcgtgagctatgaaaatgaagagactatcaagctttatgat
tacgcgcaaaggatcttaaacgcacttcaaggcttggatttgaccatcatttgtgagccg
ggccgatccatcgtggctgagagtggggaattgatcacgcaggttttgtatgaaaaaaag
gctcaaaacaagcgctttgtgattgtggatgcgggcatgaatgattttttacgccccagt
ttgtatgatgctaagcatgccataagggttataacgccctctaaggggcgtaagatctcg
ccttgcgatgtggtagggcctgtgtgtgagagcagcgacacttttttaaaaggcgtccat
ttgccagaattagagccaggcgataaattagtcatagaaaaggttggggcttatggatct
agcatggccagtcaatacaattcgcgccccaaactattagaattagccctagaagatcat
aaaatcagggtgataagaagaagagaggctttagaagatttatggcgcttagaagaagaa
ggcttaaaaggggtttga
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