Helicobacter pylori OK310: HPOK310_0391
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Entry
HPOK310_0391 CDS
T02542
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase B
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
hpyl
Helicobacter pylori OK310
Pathway
hpyl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HPOK310_0391 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpyl03400
]
HPOK310_0391 (ruvB)
Enzymes [BR:
hpyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPOK310_0391 (ruvB)
DNA repair and recombination proteins [BR:
hpyl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HPOK310_0391 (ruvB)
RecFOR pathway proteins
HPOK310_0391 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
DUF815
RNA_helicase
AAA_3
nSTAND3
AAA_2
Sigma54_activ_2
AAA_14
TIP49
Bac_DnaA
bpMoxR
Rad17
DUF3738
HAMP_2
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BAM97819
LinkDB
All DBs
Position
complement(401934..402944)
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AA seq
336 aa
AA seq
DB search
MKERIVNLETLDFETSQEVSLRPNLWEDYIGQEKIKSNLQVSICAAKKRQESLDHMLFFG
PPGLGKTSISHIIAKEMETNIKITAAPMIEKSGDLAAILTNLQAKDILFIDEIHRLSPAI
EEVLYPAMEDFRLDIIIGSGPAAQTIKIDLPPFTLIGATTRAGMLSNPLRDRFGMSFRMQ
FYSPSELALIIKKAAAKLNQDIKEESADEIAKRSRGTPRIALRLLKRVRDFALVKNSSLM
DLNITLHALNELGVNELGFDEADLAYLSLLANAQGRPVGLNTIAASMREDEGTIEDVIEP
FLLANGYLERTAKGRIATPKTHALLKIPTLNPQTLF
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaacggatagtcaatttagaaactttggattttgaaacttctcaagaagtgagt
ttgcgccctaatctttgggaagattatatcggtcaagaaaagattaaaagcaatttgcaa
gtttctatttgcgcggctaaaaaacgccaagaaagtttggatcacatgctcttttttggc
ccacccggtttgggtaaaacttcaataagccatatcatcgctaaagaaatggaaaccaat
atcaaaatcaccgccgctcccatgatagaaaaaagcggtgatttggccgccattttgacc
aatttgcaagctaaagacattctttttattgatgaaatccaccggcttagcccagcgatt
gaagaggttttatacccggctatggaagatttcaggctggatattatcataggctcaggt
ccagcggctcaaaccattaaaattgatttgccccctttcaccctcatcggcgctaccact
agagccggaatgctctctaaccccttaagagacagatttggcatgagctttagaatgcaa
ttttatagccctagcgaattagcccttatcatcaaaaaagccgccgctaaactcaaccaa
gacatcaaagaagaaagcgctgatgaaatcgctaaaaggagtagaggcacgccaagaatc
gctttaaggcttttaaaaagggtgcgcgattttgcgttagtcaaaaattcaagcttgatg
gatttaaacatcactttgcatgctttgaatgagttaggcgtgaatgaattaggctttgat
gaagcggatttggcgtatttgtctttgttggctaacgctcaaggacgaccagtaggtttg
aacacgattgcagcatctatgagagaagatgaaggcacgattgaagatgtgattgagcct
tttttactcgctaatggttatttagagcgcaccgctaaaggcagaatcgccacgcctaaa
acccatgcgcttttaaaaatccccactttaaacccccaaactttattttaa
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