Helicobacter pylori OK310: HPOK310_0629
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Entry
HPOK310_0629 CDS
T02542
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hpyl
Helicobacter pylori OK310
Pathway
hpyl03030
DNA replication
hpyl03430
Mismatch repair
hpyl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPOK310_0629 (dnaX)
03430 Mismatch repair
HPOK310_0629 (dnaX)
03440 Homologous recombination
HPOK310_0629 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpyl03032
]
HPOK310_0629 (dnaX)
03400 DNA repair and recombination proteins [BR:
hpyl03400
]
HPOK310_0629 (dnaX)
Enzymes [BR:
hpyl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPOK310_0629 (dnaX)
DNA replication proteins [BR:
hpyl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPOK310_0629 (dnaX)
DNA repair and recombination proteins [BR:
hpyl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPOK310_0629 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_14
RCF1-5-like_lid
DNA_pol3_gamma3
AAA_5
EH_Signature
AAA_30
DEAD
AAA_assoc_2
AAA_lid_RFC1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
BAM98057
LinkDB
All DBs
Position
640390..642105
Genome browser
AA seq
571 aa
AA seq
DB search
MQVLALKYRPKHFSELVGQESVAKTLSLALDNQRLANAYLFSGLRGSGKTSSSRIFARAL
MCEEGPKAVPCDTCPQCQSALNNHHIDIIEMDGASNRGIDDVRNLIEQTRYKPSFGRYKI
FIIDEVHMFTTEAFNALLKTLEEPPSHVKFLLATTDALKLPATILSRTQHFRFKKIPENS
VISHLKTILEKEQVSYETSALEKLAHSGQGSLRDTITLLEQAINYCDNAITESKVAEMLG
AIDRSVLEDFFQSLINQDEARLQERYAILENYETESVLEEMMLFLKAKLLSPDSYSILLI
ERFFKIIMSGLSLLKEGANASFVLLLLKMKFKEALKLKALDDAILELEQSKESVLKPLNQ
NANAFKQESAEKIEKPEKRESAETPQTPMFSAKDRIFHNLFKQVQTLVYERNYELGAVFE
KNIRFVDFDSQTKTLTWESLATHKDKELLRERFKIVKSIVDGVFGKGENIKIALKNHSEN
KSALEEIKEFKFPSLKPKPTTETTAETKEKEVQENDTKEAIEKETKENNIKEIQETQPKE
TPTALQEFMANNSNLIEEIKSEFEIKSVELL
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttttagcgttaaaataccgccccaaacattttagcgagctagtcggtcaagag
agcgtggctaaaacgctttctttagccctagacaaccagcgtttggctaacgcttattta
ttcagtgggttaagaggttctgggaaaaccagttcttctaggatttttgctagggcttta
atgtgtgaagaagggccaaaagccgtgccttgcgatacttgcccccaatgccagagcgct
ttaaataaccatcatatagatattatagaaatggacggggcgtctaatagggggattgat
gatgtccgtaatctcatagagcaaacgcgctacaaaccaagctttgggcgctataaaatc
tttatcattgatgaagtgcatatgttcaccaccgaagcgtttaacgcgcttttaaagact
ttagaagagcctcctagccatgtgaaattccttttagcgacaacggacgccttgaaattg
cccgctaccatactcagccgcacccagcatttcaggtttaaaaaaatccctgaaaattcc
gttatttctcatttaaaaaccattttagaaaaagaacaagtgagctatgaaacaagcgcg
ttagaaaaactggctcacagcgggcaagggagcttgagggatacaatcactcttttagag
caagccatcaattattgcgataacgctatcacagaaagcaaagtggctgaaatgttagga
gcgattgatcgaagcgttttagaagatttttttcaaagcctaatcaaccaagatgaagcg
cgattgcaagagcgttatgccattttagaaaattatgaaaccgagagcgttttagaagaa
atgatgctttttttgaaagcgaaattattaagccctgattcgtattccatccttttaata
gagcgcttttttaaaatcattatgagtggtttgagccttttaaaagaaggggctaatgcc
agttttgtgctgttgttattgaaaatgaaattcaaagaagctttgaaactcaaagcccta
gacgatgcgattttggaattagagcaaagcaaagaaagcgttttaaagcccttaaaccaa
aacgctaacgcctttaaacaagaaagtgcagagaaaatagaaaagccagaaaaaagagaa
agcgcagaaaccccgcaaacccccatgttttcagccaaagatcgcatttttcacaacctt
ttcaaacaagttcaaacattggtttatgagcgcaactacgaattaggggcggtgtttgaa
aaaaatatccgttttgttgattttgacagccagactaaaaccttgacttgggagtcttta
gccacccataaagataaagagcttttaagagagcgttttaaaatcgtgaaaagtatcgtt
gatggggtttttggcaagggcgaaaatatcaaaatcgctttaaaaaatcattcagaaaat
aaaagtgctttagaagaaattaaagagtttaaattcccctctttaaagcccaaaccaacc
accgaaacgacggctgaaactaaagaaaaagaggttcaagaaaacgacactaaagaagcg
attgaaaaagaaactaaagaaaacaacattaaagagattcaagaaacccaaccaaaagaa
acccctacagccttgcaagaattcatggctaataattccaatctcattgaagagattaag
agcgagtttgaaattaaaagcgtggaattgttatga
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