Helicobacter pylori OK310: HPOK310_0876
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Entry
HPOK310_0876 CDS
T02542
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hpyl
Helicobacter pylori OK310
Brite
KEGG Orthology (KO) [BR:
hpyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpyl03016
]
HPOK310_0876 (truD)
Enzymes [BR:
hpyl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HPOK310_0876 (truD)
Transfer RNA biogenesis [BR:
hpyl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPOK310_0876 (truD)
Prokaryotic type
HPOK310_0876 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
GutM
Motif
Other DBs
NCBI-ProteinID:
BAM98304
LinkDB
All DBs
Position
944210..945355
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AA seq
381 aa
AA seq
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MNLNFMPLLHAYNHASIDFHFNSSARDFCVHEVPLYEFSNTGEHAVIQVRKSGLSTLEML
QVFSQILGVRIAELGYAGLKDKNALTTQYISLPKKYAPLLEKNTHNLQERNLKILSLNYH
HNKIKLGHLKGNRFFMRFKKMTPLNAQKTEQVLEQIVQFGMPNYFGPQRFGKFNDNHQEG
LKILQNQTKFAHQKLNAFLISSYQSYLFNALLSKRLEISKIISAFSLKENLEFFKQKNLN
INPNTLKALKNQAHPFKILEGDVMCHYPYGKFFDALELEKESERFLKKEAAPTGLLDGKK
ALYAKNLSLEIEKEFQHNLLNSHAKTLGSRRFFWVFAENITSQYVKEKAQFELGFYLPKG
SYASALLKEIKHEKGENNDEF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaattttatgcccctattgcatgcttacaaccatgcgagcattgattttcat
ttcaattctagcgctagggatttttgcgtgcatgaagtgcctttgtatgaatttagtaac
acaggcgaacatgccgttatccaagtgagaaaaagcggtttaagcactttagaaatgctt
caagttttttctcaaattctaggggtaagaatcgctgaattgggttatgcgggcttgaaa
gataaaaacgcgctgacgactcaatacatctcactccctaaaaaatacgcccctttatta
gaaaaaaatacgcataatttgcaagaaagaaaccttaaaatcctgtctttgaattaccac
cataataagatcaaattagggcatttgaaagggaatcgcttttttatgcgttttaaaaaa
atgacccccttaaacgctcaaaagactgaacaggttttagaacaaatcgtgcagtttggc
atgcctaattattttggcccgcaacgctttgggaagttcaatgacaaccaccaagagggt
ttaaaaatcttgcaaaatcaaacgaaattcgcccatcaaaaattaaacgcttttttaatt
tcaagctatcaaagttatttgtttaacgcgcttttaagcaaacgattagaaatcagtaaa
atcattagcgcttttagcctgaaagaaaatttagaattttttaaacaaaaaaatttaaat
atcaatccaaacaccctaaaagcccttaaaaaccaagcccacccctttaaaatcttagaa
ggcgatgtgatgtgccattacccttatgggaagttttttgacgctttagaattagaaaaa
gagagcgaaaggtttttgaaaaaagaagctgcgcctacggggttattagatggcaaaaaa
gctctttatgcaaaaaatttgagtttagaaattgaaaaagaattccagcataacctttta
aatagccatgctaaaacgctaggctctaggcggtttttttgggtgtttgcagaaaatata
acttctcaatatgtgaaagaaaaagcgcaatttgaattgggattttacttgcctaaaggg
agttatgcgagcgcgttgctcaaagaaatcaagcatgagaaaggagaaaataatgacgaa
ttttga
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