Helicobacter pylori OK310: HPOK310_1222
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Entry
HPOK310_1222 CDS
T02542
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
hpyl
Helicobacter pylori OK310
Pathway
hpyl04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
hpyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
HPOK310_1222 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpyl03016
]
HPOK310_1222 (trmU)
Enzymes [BR:
hpyl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
HPOK310_1222 (trmU)
Transfer RNA biogenesis [BR:
hpyl03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
HPOK310_1222 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
QueC
DUF7411
Asn_synthase
ThiI
Diphthami_syn_2
THF_DHG_CYH
Arginosuc_synth
NAD_synthase
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
BAM98650
LinkDB
All DBs
Position
complement(1308968..1309996)
Genome browser
AA seq
342 aa
AA seq
DB search
MKIAVLLSGGVDSSYSAYSLKEQGHELVGIYLKLHASEKKHDLYIKNAQKACEFLGIPLE
VLDFQKDFKSAVYDEFISAYEEGQTPNPCALCNPLMKFGLALDHALKLGCEKIATGHYAR
VKEIDKVSYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDIKPLALNAMPFLGT
LETYKESQEICFVEKSYIDTLKKHVEVEKEGVVKNLQGEIIGTHKGYMQYTIGKRKGFSV
KGALEPHFVVGIDAKKNELIVGKKEDLATHSLKAKNKSLTKDFKNGEYFIKARYRSVPTK
AHVNLRDEVIEVEFEEPFYGVAKGQALVVYKDDILLGGGVIV
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagcggtattactcagtgggggggtggatagctcttatagcgcttatagctta
aaagagcaagggcatgaattagtggggatttatttaaaactccatgcgagcgaaaaaaag
catgatttatatattaaaaacgctcaaaaagcgtgcgagtttttaggcattcctttagag
gtgttggattttcaaaaggattttaaaagcgcggtttatgatgaatttatcagcgcttat
gaagaagggcaaaccccaaacccttgcgcgttgtgcaaccctttaatgaaatttgggtta
gctttagatcacgctttaaaattggggtgtgaaaagatcgctaccgggcattatgcgaga
gtcaaagaaattgacaaggtaagctatattcaagaggctttggataaaactaaagatcag
agctattttttatacgctttagagcatgaagttattgctaaattggtgttccctttaggg
gatttgttaaaaaaggatattaagcctttagccttgaatgcgatgccttttttaggcact
ttagagacttataaagaatctcaagaaatctgctttgtggaaaaaagctacattgacacc
ttaaaaaagcatgttgaagtggaaaaagagggcgtggtgaaaaacctgcaaggcgaaatc
attggcacgcataagggctatatgcaatacacgattggcaaacgcaaaggctttagtgtt
aaaggcgcgttagagccgcattttgtggtggggattgacgctaaaaagaacgagttaatt
gtgggcaaaaaagaagatttagccacgcattccctcaaggctaaaaacaaatctttaacg
aaagattttaaaaatggcgaatattttatcaaggcccgttataggagcgtgcctactaaa
gcgcatgtgaatttgagagatgaggtgattgaagtggagtttgaagagcctttttatggc
gtggctaaagggcaagccttagtcgtttataaagatgacatcttgcttggtgggggcgtg
attgtttag
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