Helicobacter pylori OK310: HPOK310_1276
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Entry
HPOK310_1276 CDS
T02542
Name
(GenBank) conserved hypothetical ATP-binding protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
hpyl
Helicobacter pylori OK310
Pathway
hpyl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPOK310_1276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpyl03019
]
HPOK310_1276
Messenger RNA biogenesis [BR:
hpyl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HPOK310_1276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
RMMBL
RNase_J_C
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
BAM98704
LinkDB
All DBs
Position
complement(1365426..1367501)
Genome browser
AA seq
691 aa
AA seq
DB search
MTDNNHYENNENSSENPKAHHEARAGAFERFTNRKKRFRENAQKNTDSSNHEVPSHHKKE
RHPNKKPNHHHKAKHTPQKTRNYAQEELDNNKVEGVTEILHVNERGTLGFHKELKKGVEA
NNKIQVEHLNPHYKMNLNSKASVKITPLGGLGEIGGNMMVIETPKSAIVIDAGMSFPKEG
LFGVDILIPDFSYLHQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGLIGS
KFDEHGLKKYRSYFKIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHTGDF
KIDHTPVDNLPTDLYRLAHYGEKGVMLLLSDSTNSHKSGITPSESTIAPAFDTLFKEAQG
RVIMSTFSSNIHRVYQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIEANE
VAKYPDNEILIVTTGSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVSAV
LNFLIKKEAKVAYQEFDNIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQTAI
SCGVPEKNIYLMEDGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASA
GVFAATIFVNKNKQALLESSQFSSLGLVGFKDEKHLTKEIQGGLELLLKSSNAEILNNPK
KLEDHTRNFIRKALFKKFRKYPAIICHVHAT
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgactgataacaaccattatgaaaataatgaaaacagcagtgaaaacccaaaagctcat
catgaggcgcgagccggagcgtttgagcgattcaccaaccgcaaaaagcgttttagagaa
aacgcacaaaaaaacacagactcttcaaaccatgaagtgccttcacaccataaaaaagag
cgccaccccaacaaaaaaccaaaccaccaccacaaagccaaacacaccccccaaaagact
agaaattacgcccaagaagaattggataacaacaaagtagagggcgttacggaaattttg
catgtgaatgagagagggactttaggctttcataaggagctcaaaaagggcgttgaagct
aataacaagatccaagtggagcatttaaacccgcattataagatgaatctaaactctaaa
gcgagcgttaaaatcacgcctttagggggcttgggcgagattggggggaacatgatggtc
attgaaaccccaaaaagcgcgatcgtgattgatgcgggcatgagcttccctaaagaaggg
ctatttggcgtggatattttaatcccggatttttcctacttgcaccaaatcaaggacaaa
atcgctggcattatcatcacccatgcccatgaagatcacataggagccacgccttatttg
tttaaagaattgcaattccccctttatggcacgcccttgagtttggggttgattgggagc
aagtttgatgaacatggtttgaaaaaataccgctcgtattttaaaatcgtagaaaagcgc
tgccctattagcgtgggcgaatttatcattgaatggatccacatcacgcattctatcatt
gacagcagcgctttagcgatccaaactaaagccggaacgatcattcacaccggcgatttt
aaaattgatcacaccccggtggataatttgcccactgatttgtatcgtttagcgcactat
ggcgaaaagggggtgatgcttcttttaagcgattccactaactcccataaatccgggatc
acaccgagtgaaagcaccatagcgccggcttttgatacgctttttaaagaagcgcaaggg
agggtgattatgagcacattctctagcaatatccaccgggtgtatcaagccatacaatac
ggcattaaatacaaccgcaagatcgctgtgatcgggcgctctatggaaaaaaacctagac
atcgccagagaattaggctatatccatttgccttatcaatcttttattgaagccaatgaa
gtcgctaaatacccggataatgaaatcttaatcgtaacgaccggctcacaaggcgaaacc
atgagcgcgctttatcgcatggcgactgatgaacaccgccacatttctatcaaacccaac
gatttagtcatcatctccgctaaagccattcctggcaatgaagcgagcgtttcagcggta
ttgaattttttaatcaaaaaagaagctaaagtggcttatcaagaatttgacaatatccat
gtgagcgggcatgccgcccaagaagagcaaaagctcatgttaagactcattaagcctaag
tttttcttgcccgtgcatggggaatataaccatgttgcgcgccacaagcaaaccgctatt
tcttgcggggtgcctgaaaaaaatatctatttaatggaagatggcgatcaagtggaagtt
ggccctgcgttcattaaaaaagtaggcacgattaaaagcggtaaaagctatgtggataac
caaagcaatttgagcattgatacaagcatcgtgcaacaaagagaagaagtcgctagcgct
ggggtgtttgccgctacgatttttgtgaataaaaacaaacaagcgcttttagaaagctct
caattttccagtttagggcttgtgggctttaaagatgaaaagcatttgacaaaagaaatt
caaggaggattggagttgttattgaaatccagcaacgccgaaattttgaataaccctaag
aaattagaagatcacacccgtaatttcatcagaaaagcgctctttaaaaagtttagaaaa
tacccggctatcatttgtcatgtccatgccacttga
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