Helicobacter pylori OK310: HPOK310_1329
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Entry
HPOK310_1329 CDS
T02542
Symbol
serS
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
hpyl
Helicobacter pylori OK310
Pathway
hpyl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hpyl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HPOK310_1329 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hpyl01007
]
HPOK310_1329 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpyl03016
]
HPOK310_1329 (serS)
Enzymes [BR:
hpyl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
HPOK310_1329 (serS)
Amino acid related enzymes [BR:
hpyl01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HPOK310_1329 (serS)
Transfer RNA biogenesis [BR:
hpyl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HPOK310_1329 (serS)
Prokaryotic type
HPOK310_1329 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Rod_CreS
Surfac_D-trimer
Motif
Other DBs
NCBI-ProteinID:
BAM98757
LinkDB
All DBs
Position
complement(1420647..1421894)
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AA seq
415 aa
AA seq
DB search
MIDKKLLLQDFEMVALSLKKRNNAMDDELERLREVITHYKKQLIELEGLQAFQNRVSKEF
GIKMAQKVDTSDLKKELENNKIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGTSEE
DNIEIKKILTPRNFTFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRALIH
LMLDFNEKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLTNLY
NDTIVSVEKLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDVMQE
HMLESASEILKALELPHRFVQLCSTDLGFSASNTIDIEVWLPGQNCYREISSVSNTRDFQ
ARRAKIRFKENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgattgataaaaaacttttattgcaagattttgagatggtggctctttctttaaaaaag
cgtaacaatgcgatggatgatgaattggagcgtttgcgcgaagtcatcacgcattataaa
aagcaactcattgaattagaaggcttgcaagcctttcaaaacagggtttctaaagaattt
ggtatcaaaatggctcaaaaagtggatacaagcgatctcaaaaaagagctagaaaacaat
aaaatcaaactgaatgagctttccaaaagcgtgggcgaattggaacaacaaatagattta
aagctttcaataatccctaatctggtggatgaaaaaacccctttaggcacaagcgaagaa
gacaatatagagattaaaaaaatcttaacccctagaaatttcactttcaaacccaaagag
cattttgagctcgctcaacaaaatggctggattgattttgaaagcggcgtgaaactcgcc
aaaagccgtttttctgtcattaggggttttggggctaaaatttatcgtgcgctcattcat
ttaatgttggattttaatgaaaaaaatggctttgaaatcatctacacgccggcgttagtg
aatgaaaaaatgctttttgggaccgggcaattgcccaaattcaaagaagatgttttcaaa
atagaaaatgaaaatttgtatctgatccctaccgctgaagtaacgctcactaatctatac
aacgatacgattgttagcgttgaaaaactccctattaaaatgaccgcacacacgccttgt
tttaggagcgaagcggggagtgcgggcaaggacacaagggggatgataagacaacaccag
tttgataaagtagagctagtggctatcacgcaccctaaagaaagcgatgttatgcaagag
catatgctagagagcgcgagcgaaattttaaaggctttggaattaccgcaccggtttgtg
caattgtgcagcacggatttaggttttagtgcaagcaacacgatagatattgaagtgtgg
ctgcccgggcaaaattgctacagagaaatcagctccgtgtctaacacgagggattttcaa
gccaggcgcgcgaaaatccgcttcaaagaaaatcaaaaaaaccaattagcgcacacctta
aacggctcttctttagcggtaggcaggacgatggtcgctttaatggaaaaccaccagcaa
gcggatgggagcattcatattcctaaggcgttagaaaaatacctttaa
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