Helicobacter pylori OK310: HPOK310_1478
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Entry
HPOK310_1478 CDS
T02542
Symbol
dniR
Name
(GenBank) regulatory protein DniR
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
hpyl
Helicobacter pylori OK310
Brite
KEGG Orthology (KO) [BR:
hpyl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpyl01011
]
HPOK310_1478 (dniR)
Enzymes [BR:
hpyl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HPOK310_1478 (dniR)
Peptidoglycan biosynthesis and degradation proteins [BR:
hpyl01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HPOK310_1478 (dniR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
HTH_Mga
Phage_lysozyme2
SLT_2
Motif
Other DBs
NCBI-ProteinID:
BAM98906
LinkDB
All DBs
Position
complement(1578177..1579289)
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AA seq
370 aa
AA seq
DB search
MKYFNTKWLFFLMTHWFLLASLGHAKMAFESNIDTKALEAFGVNAGFLSQMPNALKKMNK
EEEWKKLVKRFDVNYQFIPIIKNMLIEASVPQEFLFLAMAESKFSSRAYSRKKAVGIWQF
MPSTAKELGLKVNHYIDERRDPIKSTQAAITYLKRLYKQTGEWYLVAMAYNYGLRKVQNA
IKAAGTSDIKILLDEDKKYLPKETREYIRSILSLALKFNSLDNLKDKEYLLNRGARVSLV
GVPFKRHTSLVQVAKNLNLSLETLKSYNHQFRYNILPSKDPTYTIYIPYEKLALFKRRQL
KQNKNIQANSKSPFITHVVLPKETLSSIAKRYQVSISSIQLANNLKDSNIFIHQRLIIPT
NKKLLATREF
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaaatattttaataccaaatggttgttttttttaatgactcattggttcttactggct
tctttaggccatgcgaaaatggcttttgaatccaatattgacaccaaagcgttagaggct
tttggggttaatgcgggctttttatcccaaatgccaaacgctttaaaaaaaatgaataaa
gaagaagaatggaaaaagttagtcaaaagatttgatgtgaattaccagttcatccccatc
attaaaaacatgctaatagaagcgagcgtgccgcaagaatttttatttttagccatggca
gagtctaaattttcatcaagggcttatagcaggaaaaaagcggtagggatttggcaattc
atgccaagcacggctaaagaattagggcttaaggtcaatcattacattgatgaaagaaga
gatcccattaaaagcactcaagcggctattacctacttgaaacggctctacaagcaaacc
ggggagtggtatttggtcgctatggcgtataattacggcttgcgcaaggttcaaaacgct
attaaagccgccggcacttcggacattaagattttgttagatgaagataaaaaatacctc
cccaaagaaacacgagagtatatccgctccattctaagcctggcgttgaaattcaacagc
ctagacaacctcaaagataaagaatatctgctcaatcgtggggcgagggtgagtttagtg
ggcgtcccgtttaaaagacacacttctttagtccaagtggctaaaaatttaaacttgagt
ttagaaaccttaaagtcttataaccaccaattccgctataacattctgccttctaaagac
cccacctacaccatttatatcccttatgaaaaactcgctcttttcaaacgacgccagctc
aaacaaaataaaaacattcaagccaattcaaaaagcccttttatcacccatgtggtcttg
cctaaagaaaccttatcttctatcgctaaacgctatcaagtcagcatttccagtatccaa
ttagccaataacctcaaagattctaacatttttatccaccagcgcttaatcatccccacc
aacaaaaaattactcgctacaagggaattttaa
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