Helicobacter pylori UM299: K749_01460
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Entry
K749_01460 CDS
T02661
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
hpym
Helicobacter pylori UM299
Pathway
hpym03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpym00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K749_01460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpym03021
]
K749_01460
03019 Messenger RNA biogenesis [BR:
hpym03019
]
K749_01460
Transcription machinery [BR:
hpym03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
K749_01460
Messenger RNA biogenesis [BR:
hpym03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K749_01460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_22
AAA_28
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
AGL67684
LinkDB
All DBs
Position
complement(1327544..1328860)
Genome browser
AA seq
438 aa
AA seq
DB search
MNENAPTHKSPHKVKTHTPVSGYHIEDLRTYPTEKLLEIANKLKVENPQEFKRQDLMFEI
LKTQVTQGGYILFTGILEIMPDGYGFLRGFDGSFSDGHNDTYVSPSQIRRFALRNGDIVT
GQVRSPKDQEKYYALLKIEAINYLPSDEIKNRPLFDNLTPLFPDEQIKLEYEPTKVTGRM
LDLFSPVGKGQRALIVAPPRTGKTELMKELAQGITSNHPEVELIILLVDERPEEVTDMQR
SVKGQVFSSTFDLPANNHIRIAELVLERAKRRVEMGKDVVVLLDSITRLARAYNAVTPSS
GKVLSGGVDANALHRPKRFFGAARNIEEGGSLTIIATALIETGSRMDEVIFEEFKGTGNS
EIVLARNIADRRIYPAFDILKSGTRKDNILLGKDRLTKVWVLRNVMQQMDDIEALSFVYS
KMQQTKDNEEFLNLMNEK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaacgcgcctacgcataaaagtccgcacaaagtcaaaacacacacgccagtg
agcggttatcacattgaagatttacgcacctaccctactgaaaagcttttagaaatcgct
aacaagctcaaagtggaaaacccccaagaattcaaacgacaagacttgatgtttgaaatt
ttaaaaacccaagttacgcaaggcggatacattctttttactgggattttagaaatcatg
cctgatggctatggctttttaagagggtttgatgggagtttttcagacgggcataacgac
acttatgtcagcccttctcaaatcaggcgttttgctttaaggaatggtgatattgttacc
ggtcaagtgcgatcccccaaagaccaggaaaagtactacgcccttttaaaaatagaagcc
atcaattatttgccttcagatgagattaaaaaccgccccttgtttgacaatctaacccct
ctattccctgatgaacaaatcaaattagaatacgaacccactaaagttaccggcagaatg
ctagatttattcagccctgtggggaaaggtcaaagggctttgatcgtcgcgccaccaagg
actgggaaaacggaactcatgaaagaactcgcccaaggcatcacctctaaccaccctgaa
gtggagctgattatccttttagtggatgagcgccctgaagaagttacggatatgcaacga
agcgttaaaggtcaagtttttagctccacttttgatctgcccgcaaacaaccacataaga
atcgctgaattagtcctagaaagggctaaaaggcgggtggaaatgggcaaagatgtggtg
gttttactagattctatcacccgtttagccagagcgtataacgctgtaacgccttcaagc
ggtaaggttttaagtggaggcgtggatgcgaacgccttgcacaggcccaagcgctttttt
ggagccgcaaggaatattgaagaaggcgggagcttaacaattatcgctactgcattgatt
gaaacgggatctagaatggatgaggtgatttttgaagaatttaaaggcaccgggaatagc
gaaattgttttagcgaggaatattgcagacagacgcatttacccggcctttgatatttta
aaatccggcacacgaaaagataatattttgcttggcaaagaccgcttgactaaagtgtgg
gttttaaggaatgtgatgcaacaaatggatgacatagaagccttaagctttgtgtattct
aaaatgcaacaaactaaggacaatgaagaatttttaaatttaatgaatgaaaaataa
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