Helicobacter pylori UM299: K749_02235
Help
Entry
K749_02235 CDS
T02661
Name
(GenBank) UvrABC system subunit A
KO
K03701
excinuclease ABC subunit A
Organism
hpym
Helicobacter pylori UM299
Pathway
hpym03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hpym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K749_02235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpym03400
]
K749_02235
DNA repair and recombination proteins [BR:
hpym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K749_02235
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K749_02235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_29
nSTAND1
RsgA_GTPase
nSTAND3
AAA_16
DnaJ_CXXCXGXG
AAA_21
APS_kinase
SLFN-g3_helicase
Viral_helicase1
AAA_23
AAA_15
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
AGL67839
LinkDB
All DBs
Position
complement(1495807..1498614)
Genome browser
AA seq
935 aa
AA seq
DB search
MDKIIIQGARENNLKNIFLEIPKNQFVVFTGLSGSGKSTLAFDTLYAEGQRRYLESLSSY
ARQFLDKVGKPNVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLFARIGEQFC
PTCLEPISSMSASDIISQICHLEENSKIIILAPIIKDKKGSFNDKLESLRLKGYVRAFVD
GVMVRLDEEIHLHKTKKHTIEAVVDRVVINSENSSRIASAVEKALKESYGELEVEILQDN
APSIRKHYSEHKACFKCKMSFEELEPLSFSFNSPKGACESCLGLGTKFSLDISKILDPNT
PLNQGAIKVIFGYNRSYYAQMFEGFCEYNGIDTALCFNELSKEQQDALLYGNGTEISFHF
KNSPLKRPWKGIIQIAYDMFKEQKDLSDYMSEKTCSSCEGHRLKASSLSVQVAGLKMADF
LTKPIEEVYHFFNDPTHFSYLNEQEKKIAEPILKEILERVFFLYDVGLGYLTLGRDARTI
SGGESQRIRIASQIGSGLTGVLYVLDEPSIGLHEKDTLKLINTLRNLQKKGNTLIVVEHD
KETIKHADFVVDIGPKAGRHGGEVVFSGSVKDLLQNNHSTALYLNGTKKIERPKLELPKE
KHFLEIKNVNINNIKNLSVQIPLKQLVCITGVSGSGKSSLILQTLLPTAQTLLNHAKKIQ
SLNGVEIVGLEHLDKVIYLDQAPIGKTPRSNPATYTGVMDEIRILFAEQKEAKILGYSAS
RFSFNVKGGRCEKCQGDGDIKIEMHFLPDVLVQCDSCKGAKYNPQTLEIKVKGKSIADVL
NMSVEEAYEFFAKFPKIAVKLKTLIDVGLGYITLGQNATTLSGGEAQRIKLAKELSKKDT
GKTLYILDEPTTGLHFEDVNHLLQVLHSLVALGNSMIVIEHNLDIIKNADYIIDMGPDGG
DKGGKIIASGTPLEVAKNCEKTQSYTGKFLALELK
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcattattcaaggggctagggaaaataatctcaaaaatatttttttagaa
atccctaaaaaccaatttgttgtttttaccggattaagcggttcgggtaaatccactctg
gcgtttgacactttatacgctgaaggtcaaaggcgctatttagagagtttgtccagctat
gcgaggcaatttttagacaaagtgggtaagcctaatgtggataaaattgaaggtctaacc
cctgcgattgctattgatcaaaaaaccacttctaaaaaccctagatccactgtggggacg
atcactgagatttatgattatttaaggttgttgtttgcaaggattggggagcaattttgc
cccacatgtttagagcccatcagttctatgagcgcgagcgatattatttctcaaatctgt
catttagaagaaaattctaaaatcattattctagcccccattattaaagataaaaaaggt
tcgtttaacgataaattagagagcttgcgtttaaaggggtatgtgagggcttttgttgat
ggggtgatggtgcgtttagatgaagaaatccatttgcacaaaaccaaaaaacacaccatt
gaagcggtggtggatagggtggttatcaatagcgaaaattcttcacggatcgctagtgca
gtagaaaaagcccttaaagaaagctatggggaattagaagtggaaatcttgcaagacaac
gcgccaagcatcaggaagcattacagcgagcataaggcatgctttaaatgcaagatgagt
tttgaagaattagagcctttgagtttttcattcaattcgcctaaaggggcgtgcgagagc
tgtttgggtttggggacaaaattcagcttagatattagtaagattttagatcctaacacg
cctttaaatcaaggggcgattaaagtgatttttgggtataaccgcagttattacgctcaa
atgtttgagggattttgcgaatataatggcattgatactgcactttgttttaacgaattg
agtaaagagcaacaggacgctcttttgtatgggaatggcactgaaatcagctttcatttc
aaaaacagccctttaaaacgcccttggaaaggcattatccaaatcgcttatgacatgttt
aaagagcagaaggatttgagcgattacatgagcgaaaaaacttgttcttcgtgcgagggg
catcgtttgaaagcctcaagtttgagcgttcaagtcgctggcttgaaaatggcggatttt
ttaactaagcccattgaagaagtctatcacttttttaatgatcccacgcattttagctat
cttaacgagcaagaaaaaaagatcgctgaacccattttaaaagagatcttagaaagggtg
ttttttttatacgatgtggggctagggtatttgactttagggagagatgcacgaacgatt
agtggaggggagagccaaaggatacgaatcgctagtcaaatcggaagtggtttgacaggg
gttttgtatgttttagacgagcctagcattggcttgcatgaaaaagacacgctcaaactc
atcaacacccttaggaatttgcaaaaaaaggggaacacgctcattgtcgtagaacatgat
aaagaaacgattaagcatgcggattttgttgtggatattgggccaaaggctggaaggcat
gggggtgaagtggtttttagcgggagcgtaaaagatttattgcaaaacaaccattctacc
gctttgtatctcaacggcactaaaaagattgagcgccctaaattggaactccctaaagaa
aagcattttttagaaattaaaaatgtcaatatcaataacattaagaatttgagcgttcaa
atccctttaaaacaattagtgtgcattactggggtgagcgggagcggtaaaagctcgctg
attttacaaacccttttacccaccgctcaaacccttttaaaccatgctaaaaaaattcaa
agcttgaacggggtggagattgtagggttggagcatttggataaagtgatttatttagac
caagcccccataggaaaaaccccacgaagcaaccctgccacttatacaggagtgatggat
gaaatcaggattttatttgccgagcaaaaagaagctaaaattttaggctatagcgcgagc
cgttttagctttaatgttaaaggggggcggtgcgagaaatgccaaggcgatggggatatt
aaaatagaaatgcactttttgcctgatgtgttagtccaatgcgatagctgtaagggcgct
aaatacaacccccaaactttagaaatcaaggtgaaaggcaaatccattgccgatgtgtta
aacatgagtgtagaagaagcttatgaattttttgctaaattccctaaaatcgctgtgaag
ttaaaaacccttatagatgtgggcttaggctatatcactttagggcaaaacgctacgact
ttaagcgggggggaggctcaaaggatcaaattagctaaagaattgagcaaaaaagacaca
ggcaaaaccctttatattttagatgagcctaccactggtttgcattttgaagatgtgaat
caccttttacaagtcttgcattctttagtggcgttaggcaattccatgatagtgattgag
cataatttagacatcatcaaaaacgctgattacattatagacatggggcctgatgggggg
gataagggcgggaaaatcattgcgagcggcacgcctttagaggtggctaaaaattgtgaa
aaaacccaaagctatacgggaaaatttttagctttggaattaaaatag
DBGET
integrated database retrieval system
