Helicobacter pylori UM299: K749_03550
Help
Entry
K749_03550 CDS
T02661
Name
(GenBank) RNA polymerase sigma 70
KO
K02405
RNA polymerase sigma factor FliA
Organism
hpym
Helicobacter pylori UM299
Pathway
hpym02020
Two-component system
hpym02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hpym00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K749_03550
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K749_03550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpym03021
]
K749_03550
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hpym02035
]
K749_03550
Transcription machinery [BR:
hpym03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K749_03550
Bacterial motility proteins [BR:
hpym02035
]
Flagellar system
Flagellar assembly proteins
Stator
K749_03550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
Microp_apicomplexa_17
MarR
MarR_2
KORA
HTH_34
TetR_C_44
DUF4202
HTH_10
DUF7440
Motif
Other DBs
NCBI-ProteinID:
AGL68087
LinkDB
All DBs
Position
complement(142413..143189)
Genome browser
AA seq
258 aa
AA seq
DB search
MILMMENRMPKEIQKTQTSETSEKNIEKVLNAYDKQQHHHQDALAIQYLPAVRAMAFRLK
ERLPSSIDFNDLVSIGTEELIKLARRYESALNDSFWGYAKTRVNGAMLDYLRSLDVISRS
NRKLIKSIDIEITKHLNEHGKEPSDAYLAEVLGENIEKIKEAKTASDIYALVPIDEQFNA
IEQDEITKKIEAEELLEHVQKALNQMSEREQILIQLYYFEELNLSEIKEILGITESRISQ
IIKEVIKKVRKSLGVDHG
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgattttgatgatggaaaatagaatgcccaaagaaattcaaaaaactcaaacaagcgaa
acaagtgaaaaaaatatagaaaaggttttgaacgcctatgataagcagcaacaccaccat
caagacgcgctcgctatccagtatttaccagccgtgcgcgctatggcgtttcgtttaaaa
gagcgcttgcccagctctattgattttaacgatctggtttctattggcactgaagaattg
attaaattagccaggcgttatgagagtgcgttaaacgattctttttgggggtatgctaaa
actcgtgtcaatggggcgatgctagattatttgcgctctttagatgtgatttctcgctcc
aacagaaagctgattaaaagcattgatattgaaatcaccaaacaccttaatgagcatggg
aaagagcctagcgatgcgtatttggcggaagttttaggcgaaaatattgaaaaaattaaa
gaagccaaaacggcttcagatatttatgcgttagtgccaatagatgaacaattcaatgcg
attgagcaagatgaaatcactaaaaagattgaagcagaagaattgttagagcatgtccaa
aaagcgctgaatcaaatgagcgaaagagagcaaatccttatccagctttattactttgaa
gagttgaatttgagcgagattaaagagattttaggcattactgaatcgcgcatttctcaa
atcattaaagaagtgattaaaaaggtgcgtaaatccttaggagtggatcatggctga
DBGET
integrated database retrieval system
