Helicobacter pylori UM299: K749_06560
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Entry
K749_06560 CDS
T02661
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hpym
Helicobacter pylori UM299
Pathway
hpym03420
Nucleotide excision repair
hpym03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K749_06560
03430 Mismatch repair
K749_06560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpym03400
]
K749_06560
Enzymes [BR:
hpym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K749_06560
DNA repair and recombination proteins [BR:
hpym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K749_06560
MMR (mismatch excision repair)
Other MMR factors
K749_06560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AGL68663
LinkDB
All DBs
Position
720304..722349
Genome browser
AA seq
681 aa
AA seq
DB search
MDFEKSILDNLNEAQKIAASHIQGPLLILAGAGSGKTKTLTSRLAYLIGACGVPSENTLT
LTFTNKASKEMQERALKLLKNQTLIPPLLCTFHRFGLLFLRQHMSLLKRACDFSVLDSDE
TKTLCKQLKISSFRASISQIKNGMIDLSMQDSECHKAYELYQNALKKDNLVDFDDLLFLS
LKILQDNETIAKETSERYYYIMVDEYQDTNALQLEFLKKLSFTHHNLCVVGDDDQSIYGF
RGADISNILNFSKHFKGAKVVKLETNYRSSAEILACANALISHNQHRHKKTLQSFKGSHK
SVVCKEYLTQKEESLDVAYQIKALLKKGENLENIAILYRLNGLSRSIEESLNALNIPYRL
IGAVSFYERAEVKDALAFMHLAAKKDDRFFIRRVLNKPSRGLGKITQELIFSLLDGENLN
LEEALKLGVFKGKLNPKNEHALNQFIAMIGRLREAFEISVEEFCTRFLEETNLLKSYEKE
DNYEEREGFVKELLALVKEHFKTNPTHSLLDFLNESVLDTHNTENAQKVSCMSVHMSKGL
EFKHVFVIGLEEGFFPHRGFNQESDLEEERRLAYVAITRAKEGLQLSYVQERSYFGRKIS
CSPSVFLEEAKLLKQDNPPKQDHKKDAPIKVGDLIRHKIFGTGRVLGVEKGLSGLCLKIN
CGGNVYDKISAKFVEKVDNGF
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggattttgaaaaaagcattttagacaatttaaacgaagcgcaaaaaatcgccgcaagc
cacattcaagggcctttgctgattttagcgggagctgggagcggtaagactaagacttta
acgagccgcttagcgtatttgattggcgcttgtggcgtgcctagcgagaacactttaacg
ctcactttcaccaataaagcgagcaaagaaatgcaagaaagggctttgaaattgttgaaa
aaccaaacccttatcccccccttgctttgcactttccatcgttttggtttgctgttttta
aggcaacacatgagccttttaaaaagagcgtgcgatttttcggtgttggacagcgatgaa
acaaaaacgctgtgcaaacagctcaaaatttcaagttttagagccagtatttctcaaatc
aaaaacggcatgattgatttaagcatgcaagatagcgaatgtcataaagcgtatgagctt
tatcaaaacgcgcttaaaaaagacaatttagtggattttgatgatttgctttttttaagc
cttaagattttacaagataatgaaaccatcgccaaagaaactagcgagcgctattattac
attatggtagatgagtatcaagacacgaacgccttgcaattagaatttttaaaaaaattg
agtttcacgcaccataatttgtgcgtggtgggcgatgatgatcagagtatttatggtttt
aggggggctgatatttctaacattttaaatttttccaagcattttaagggggctaaggtg
gtgaaattagagaccaactaccgctccagcgctgaaattttagcgtgcgctaacgccctt
attagccataaccaacaccgccacaaaaaaacgcttcaaagttttaaaggctcgcataaa
agcgtggtttgtaaagaatatttgacgcaaaaagaagagagcttggatgtggcttatcaa
atcaaagcccttttaaagaagggcgaaaatttagaaaatatcgctattttgtatcgctta
aacgggcttagccgcagcattgaagagagtttgaacgctttgaatatcccctataggctt
attggagcggtgagtttctatgaaagagcagaggttaaagacgctttggcgttcatgcat
ttagcggctaaaaaagacgatcgctttttcatcaggcgcgttttaaacaagccctcaaga
ggccttggcaagatcactcaagagttgattttttctcttttagatggtgagaacttgaat
ttagaagaagccctaaaacttggggtgtttaaaggcaaattaaaccctaaaaacgaacac
gctttgaatcaatttatcgctatgatagggcgtttgagggaggcttttgaaatttcagta
gaggagttttgcactcggtttttagaagaaaccaaccttttaaaaagctatgaaaaagaa
gacaattacgaagaaagagagggttttgttaaagagcttttagctttagtgaaagagcat
tttaaaactaaccccacgcattctttattggattttttgaatgaaagcgttctagatacc
cataatacagaaaacgcgcaaaaagtgagttgcatgagcgtgcatatgagtaagggatta
gagtttaagcatgtgtttgtgatcggtttagaagaagggtttttcccgcatagggggttc
aatcaagaaagcgatttagaagaagaaaggcgcttggcttacgtagcgatcactagggct
aaagaaggattgcaactctcttatgttcaagagcgttcgtattttgggaggaaaatttct
tgctcgccctctgtatttttagaagaggccaagttgctcaagcaagacaacccccctaaa
caggatcacaaaaaagacgcgcccattaaagtgggggatttgatcaggcataagattttt
ggcaccggtagggttttaggcgtagaaaaaggcttgagcggtttgtgcttgaaaatcaat
tgcggagggaatgtctatgataaaatctcagcaaaatttgtagaaaaagtggataacggg
ttttga
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