Helicobacter pylori OK113: HPOK113_0003
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Entry
HPOK113_0003 CDS
T02510
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
hpyo
Helicobacter pylori OK113
Pathway
hpyo00541
Biosynthesis of various nucleotide sugars
hpyo01100
Metabolic pathways
hpyo01250
Biosynthesis of nucleotide sugars
Module
hpyo_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
hpyo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HPOK113_0003 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpyo01005
]
HPOK113_0003 (kdsA)
Enzymes [BR:
hpyo01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
HPOK113_0003 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
hpyo01005
]
Lipid A
HPOK113_0003 (kdsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
DUF3657
Motif
Other DBs
NCBI-ProteinID:
BAM95911
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All DBs
Position
complement(909..1739)
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AA seq
276 aa
AA seq
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MKTSKTKTPKPVLIAGPCVIESLENLRSIATKLQPLANNERLDFYFKASFDKANRTSLES
YRGPGLEKGLEMLQTIKDEFGYKILTDVHESYQASAAAKVADILQIPAFLCRQTDLIVGV
SQTNAIINIKKGQFMNPKDMQYSVLKALKTRDSGIQSPTYETALKNGVWLCERGSSFGYG
NLVVDMRSLKIMREFAPVIFDATHSVQMPGGANGKSSGDSSFAPILARAAAAVGIDGLFA
ETHVDPKNALSDGANMLKPDELEHLVADMLKIQNLF
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacttctaaaacaaaaacccctaaacccgttttaatcgctgggccatgcgtcatt
gagagtttagaaaatctaagaagtatcgctactaaattacaacccctagccaacaacgag
cggttggatttttattttaaagcgagttttgataaggcgaaccgcacgagtttagagagt
tacagagggcctggtttagaaaaaggcttagaaatgttacaaaccatcaaagatgaattt
ggctataaaattttaaccgatgtgcatgagagctatcaagcaagcgcagcggccaaagta
gcggatattttacaaatcccggcgtttttgtgccgccaaacggatctgattgtaggagtg
agccaaactaacgccattatcaatatcaaaaaagggcaattcatgaacccaaaagacatg
caatattccgttctaaaagcccttaaaacgagagatagtggcattcaaagccccacttat
gaaacagcgttaaaaaatggcgtgtggctgtgtgaaagggggagcagctttgggtatggg
aatttagtggtggatatgcgctctttaaaaatcatgcgagagtttgcccctgtgattttt
gacgctactcatagcgtgcaaatgccagggggagcgaatgggaaaagttcaggagacagc
tcttttgcccctattttagccagagctgcggctgcggtggggattgatgggctgttcgct
gaaacgcatgttgatcctaaaaacgctttaagcgatggggcaaacatgctaaaacctgac
gagctagaacatttagtagccgacatgttaaaaatccaaaatttattttaa
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