Helicobacter pylori OK113: HPOK113_0051
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Entry
HPOK113_0051 CDS
T02510
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hpyo
Helicobacter pylori OK113
Pathway
hpyo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPOK113_0051 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpyo03400
]
HPOK113_0051 (ung)
Enzymes [BR:
hpyo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HPOK113_0051 (ung)
DNA repair and recombination proteins [BR:
hpyo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPOK113_0051 (ung)
Prokaryotic type
HPOK113_0051 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAM95959
LinkDB
All DBs
Position
55922..56623
Genome browser
AA seq
233 aa
AA seq
DB search
MKLFDCAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKSPKTIFPKSSNLFYALNLTPPS
AVKIILLGQDPYHSTYLENQQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANLGVPVPC
CRDLSAWAKRGMLLLNAILSVEKNQVASHKRIGWEAFSDQILVRLFEANAPLIVVLLGKI
AQKKIALIPKNKHIIITASHPSPLSRGFLGSGVFTSIQNAHREIYHKDFDFSL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttttgactgcgctcctttaagtttggcttggcgggagtttttgcaaagcgaa
tttaaaaagccttattttttagaaatagaaaaacgctacttagaggctctaaaaagccct
aaaaccattttccctaaaagctctaatctgttttatgcgctcaatctaacaccccctagc
gcggttaaaatcattcttttagggcaagatccctaccattccacctacctagaaaatcaa
caagaattgcctgtggcgatgggtttaagctttagcgtggaaaaaaacgcccccatcccc
ccaagcttaaaaaatatttttaaagaattgcatgcgaatttaggcgtgcctgtgccttgt
tgtagggatttgagcgcatgggctaaaaggggcatgctgttattgaacgccattttaagc
gtggaaaaaaaccaagtcgcttcgcacaaacgcatcggctgggaggcttttagcgatcaa
atattggtgcgcctttttgaagccaacgcccccttgatcgtggtgctattaggaaagatc
gcccaaaaaaagatcgctctaatccccaaaaacaaacacatcatcatcaccgcttctcac
cctagccccttatctagggggtttttagggagtggggtttttacaagcatccaaaacgcc
cacagagaaatttatcataaggattttgattttagtttatga
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