Helicobacter pylori OK113: HPOK113_0299
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Entry
HPOK113_0299 CDS
T02510
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
hpyo
Helicobacter pylori OK113
Pathway
hpyo00300
Lysine biosynthesis
hpyo00470
D-Amino acid metabolism
hpyo01100
Metabolic pathways
hpyo01110
Biosynthesis of secondary metabolites
hpyo01120
Microbial metabolism in diverse environments
hpyo01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hpyo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HPOK113_0299 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPOK113_0299 (lysA)
Enzymes [BR:
hpyo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HPOK113_0299 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
BAM96207
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Position
311900..313117
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AA seq
405 aa
AA seq
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MFNYEELFQTHKTPFYLYDFGKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAKL
ESGADCVSIGEIYRALKAGIKPYRIVFSGVGKSEFEIEQALKLNILFLNVESFMELQTIE
KIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPI
SVHFHIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYD
YTQGILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPS
LYHAKHAIRVITPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGS
SMASQYNSRPKLLELALEDQKIRVIRKREALEDLWRLEEEGLKGV
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtttaattatgaagagctgtttcaaactcacaaaacccctttttacctctatgatttt
ggcaaaatcaaacaggcttttttgaattataaagaagcgtttaaggggcgtaagtctttg
atttgctacgctttaaaggcgaattccaatttgagtatcctctctttattagccaaatta
gagagcggggcagattgtgtttccataggcgagatatatagggctttaaaagctgggatc
aagccttataggatcgtgtttagcggggtgggtaagagcgaatttgaaatagagcaagcc
ctaaaactcaacattttatttttgaatgtagaaagttttatggaattgcaaacgattgaa
aaaatcgcccaatctttagggataaaggctaggatctctattaggatcaaccctaacatt
gacgctaaaacgcacccctatatttctaccggtttgaaagaaaataagtttggcgtggga
gaaaaagaagctttagaaatgtttctttgggctaaaaaaagcgcgtttttagagcctatt
agcgtgcattttcatatcggatcacagcttttagatttagagccgattatagaagcgagt
caaaaggtggctaaaatcgctaaatctttgatagcgctagggatagatttgcgttttttt
gatgtgggcggagggattggcgtgagctatgaaaatgaagagactatcaagctttatgat
tacacgcaagggatcttaaatgcgcttcaaggcttggatttgacgatcatttgtgagccg
ggccgatcgatcgtggctgagagtggggaattaatcacgcaggttttgtatgaaaaaaag
gctcaaaacaagcgctttgtgattgtggatgcgggcatgaatgattttttacgccccagt
ttgtatcatgctaagcatgccataagggttataacgccctctaaggggcgtaagatctcg
ccttgcgatgtggtagggcctgtgtgtgagagcagcgacacttttttaaaaggcgtccat
ttgccagaattagagccaggcgataaattagtcatagaaaaggttggggcttatggctct
agcatggctagtcaatacaattcgcgccccaaactcttagaattagccctagaagatcaa
aaaatcagggtgataagaaaaagagaggctttagaagatttatggcgcttagaagaagaa
ggcttaaaaggggtttga
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