Helicobacter pylori OK113: HPOK113_0527
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Entry
HPOK113_0527 CDS
T02510
Symbol
virD4-1
Name
(GenBank) conjugal transfer protein
Organism
hpyo
Helicobacter pylori OK113
Pathway
hpyo03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hpyo00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HPOK113_0527 (virD4-1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Dsl1_C
Motif
Other DBs
NCBI-ProteinID:
BAM96435
LinkDB
All DBs
Position
543586..545181
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AA seq
531 aa
AA seq
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MNFDQRLRLVQENANNVFISEEKGEDHWVSKAKDLFSFYALYDVCSKDETNFFDVAMGPN
RDYVNLIDKRSRYYKQLYQHDKKTGEIILDPQTNEPILIPNVNARKLWYLQVSEQKYADP
KDPRNFDPNEPEPTPRSEEALDEIVRNDARAWANSAEEEFASIISTFNRFVSVFKSNQVR
IATSKMSFDYEELRTDNISLYIVIAQKDINTLAPLVRVILESIAKNLLTNESSKKEERIY
MILDEFVRFGKLPFLLEMPALCRSYNVVPLFITQDYAMIRKYYSDDDLKILKGVVHYNIV
FKMNSAEDAEIVSKEVGEFTRQSKNYSTEKNQLVFGGSSSYSHEGRNLLTAQDIMNIESD
EVIVIVTGAKATPLKLKANYWFKDKELLKRANLPIDLEVERKRVEEPTQPTTEITTPPNQ
NKQDTANLEPSNNGGYTENESSESNNENNPTTPQKESENSNPTESEKDHENPTTSQEKSK
NENTEQENDETDEILKKPLNEMNTEGKRALFKKMQQGDEESEQEVLQDTQS
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgaccaacgcctaaggcttgttcaagaaaatgctaataatgtctttattagc
gaagaaaaaggcgaagaccattgggtatctaaagctaaagatttatttagtttttacgcc
ttgtatgatgtttgttccaaagatgaaacaaacttttttgatgtcgctatgggtccaaat
agagattatgttaatttgattgacaaaagaagccgttattacaaacaactctatcaacac
gataaaaaaacaggcgaaattatcctagacccacaaactaatgagcctattttaatccct
aatgtgaatgcgagaaaattgtggtatttgcaagtttcagagcaaaaatacgccgacccc
aaagaccctagaaattttgacccaaatgaacctgaaccaactcctagaagtgaagaggca
ttagatgaaattgtaagaaatgatgcaagagcttgggctaatagtgctgaagaagaattt
gcaagtatcatttctacctttaatcgctttgtgtctgtttttaagagcaatcaagtaaga
attgctacttctaaaatgagctttgattatgaagaattaagaacggacaatattagtctt
tatattgttattgctcaaaaagatattaacacgcttgctcccttagttagagtgatttta
gaaagcattgctaaaaacttattaactaatgaaagctctaaaaaagaagaacgcatttat
atgattttagatgaatttgttagatttggtaagttgcccttcttattagaaatgccagca
ttgtgtcgttcttataatgttgtccccttattcatcacacaagattatgcgatgattaga
aaatattatagcgatgatgatttgaaaatcttaaaaggcgtggtgcattataacattgtc
tttaagatgaatagcgctgaagatgctgagattgtctctaaggaagtgggcgaatttact
agacaatctaaaaactattctactgaaaaaaatcaattagtctttggaggtagttcttct
tatagccatgagggtagaaacttactcacagcccaagacattatgaatatagaatcagat
gaagtcatcgtaattgttacaggggctaaagcgacccctttaaaactcaaagctaattat
tggttcaaagataaagagcttttaaaaagagctaatttgcccattgatttagaagtagaa
agaaaaagagttgaagaacctacgcaacccactacagaaattacaacgccccctaatcaa
aacaaacaagatacagctaacttagaaccaagcaataatggaggatatacagaaaatgaa
agtagtgaaagcaacaacgagaataatcccactacaccacaaaaagagagtgaaaattca
aacccaacagaaagcgagaaagaccatgaaaaccccactacttcacaagaaaaaagcaaa
aatgaaaacacggagcaagaaaatgatgagactgatgagattttaaaaaagccactcaat
gaaatgaacacagaaggaaaaagagccttgtttaagaaaatgcaacaaggcgatgaagaa
agcgaacaagaagttctacaagacacccaaagttaa
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