Helicobacter pylori OK113: HPOK113_0528
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Entry
HPOK113_0528 CDS
T02510
Name
(GenBank) hypothetical protein
Organism
hpyo
Helicobacter pylori OK113
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAM96436
LinkDB
All DBs
Position
545201..552538
Genome browser
AA seq
2445 aa
AA seq
DB search
MAYKPSKKKLQTLREEPNLFSILDDGDVINTSSYKQEPEPQVKEPQSSATQNPNKEQETP
NYVVKTQINTARMISRNPIEWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEANEE
GFERCITKRYDLIDTIRNKKFFSKEIDTLTYTNSLEELKEQGLEIQLTHHHETHKKTLEN
GNEIAKEYDYLKDIYQEAERTKDGELVREIIPSISSAEYFKLYNKPPFESINNENTKLNT
NDNEEVKKLEFELAKEVHILILEQNLLSATDYYSWIDKDDYASFAWKMHRLINEDKLKEN
HLSTDNANKIKQFFFDNGFILGWTKEEQSAMQENRDYSLRSALLSLEEIAQAKIELQKYY
ESVYVNGDGNKREIKPFKEILRDINNFEKAYKERYDKLVSLSAAIIQAKEGSNEQQNSNA
NNNNTIKNTIETNTSIGNNIIKNNDNNNPNLSVADLELEQQNLGEQNGKERTNRADEPNR
TRAGIPQEIHRRSEHKGLQERVERSSDEELSHQDSSLFIEPREQGGTRGVYRSSDQQAVS
EKSHRERDRLHEHVSRGDGVSARADSNGASSQASRMENGARSEEKGDNPSDERRVSQTPQ
SSSHQQNSSRDLGLSLSREQPGQTGRLRLFDHGQMGSLFPTDHENQRERNDNEPDKSSDR
ANENGDKSPRQNGSTNQEGARSERYGIAQGSPNQSVLPLAQSRLHHAGLSAPNGLGNLEE
NRDQKRRLLSNLDHLESLLNAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVGIQLLKDP
TTKIFYDKFQLKISPKKVLEILENRIKKSIETTNETLNAFNALDSQDIDGNAISSSVGLN
PIQENEIADNSVELNNTQEQTAQEQNTQENAQTTIKQETPTAPVIPLNPKIDFKPSEEVL
IKGAKTRYKANIKAIELLKELQAKQEILKGDYYATQEEQEILVQFSGWGGLESCFKKDQR
PEEFKELNALLTKDEFRRAYSSTRDAYYTPKLVIDSIYQGLDQLGFNNDNHQKEIFEPSL
GTGKFIAHAPSDKNYRFMGTELDPISANISKFLYPNQVIQNTALENHQFYQEYDAFVGNP
PYGSHKIYSSNDKELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDGKNSKMREHIAQ
NATFLGAIRLPNSVFKATGAEVSSDIVFFKKGVDEATNQSFTKAMPYYDKIIDSLDDDTL
FALQNNRFDSFTPSDQLKIVNAIASHFGFKQEKLQRWYEKIDTANFGYKEQDYKIIKDFI
DKVGENNINLNEQTLNEYFIRHPENILGHLSLEKTRYSFEINGEQIYKYELQALEDKSLD
LSQALNQAIEKLPKNVYQYHKTTLKTNALIIDANNERYEEVQKLIKNLERGELVKWDNLY
FQLEQNNEMGVFLKPTKTNSKVQDSRLKAYFKIKDALNDLTSAELSPLSSDLELKSKRVR
LNLVYDEFVKKFGYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKMQNIEPRQAQ
AKKAQIFFERTLNPKKELIITNAKEALIVSINQKGCLDLHFIRDHFTTQSLETTIKELLE
QKLIYKDHKDNGDYVLANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLELVIPKDLKA
TEIMANTNSPWIPTQYLEEFLIELAANHYEKQYGDKMTDYQLGNLKEDIKVEHLSGAYEV
FARNNELNELYGIRHKDKPHSYKVPFESLLNKVLNNRDLSVKYAQVDPNDPKKEIFITDE
EQSNLARQKAEELKEAFKDWIYKDYARRTHLEQIYNDTFNNSVLKTYDGSQLELEGFNHH
ISLRSHQKNAIFRTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTFIAVPNHLTK
QWGDEFYKAYPNANVLVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPRGII
EELKEEELVNAEKNFERQELAYKNNPRETKKPNERVFKNKLDKIRAKYDAILEKQGSHID
ISQMGIDNLIVDEAHLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNNKKIMF
LTGTPIANSLSEMYHLQRYLTPDVLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVN
RFSKFSDVQGLSTMYRAFADIVSNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGV
ADENGKYNEGSIIDRMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPSTKVEKEFSK
SYAMAENIYENYLETNATKGTQLGFIGLSTPKTHSQKVSLEAPDNAHEIENKNPLDEAQE
LLESLSSYDENGNLIAPSKKELENELKEKEVKSVNLDEEIAKGCSFDVYSDVLRHLVQMG
IPQNEIAFIHDAKTEEQKQDLFKKINRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPW
RPDELLQMEGRGIRQGNILHQNDPENFRMKIYRYATEKTYDSRMW
NT seq
7338 nt
NT seq
+upstream
nt +downstream
nt
atggcatataaacccagcaaaaagaaacttcaaactttaagagaagaacctaatttattc
agcatcttagatgatggcgatgtaatcaatactagctcttataaacaagagccagagcca
caagtaaaagaaccacaatctagcgctacacaaaatcctaacaaagaacaagaaacgcct
aattatgtcgtgaaaactcaaatcaatacagcaagaatgatttctagaaatcctattgaa
tgggcaaggtatttaagctttgaaagacgagtgcataaggataatagtaaagaagatgtc
aatttctttgctaatggtgagataaaagaaagttctcgtgtttatgaagcgaatgaggaa
gggtttgaaaggtgcataactaaaagatacgatctgattgataccataagaaataaaaaa
tttttttcaaaagaaattgacactttaacctacacaaacagcttagaagaattgaaagag
caaggtttagaaatccaattgacccaccaccatgaaacgcataagaaaaccttagaaaat
ggcaatgaaatcgctaaagaatacgactatcttaaagatatttaccaagaagcagaaaga
acaaaagatggcgaattggtaagagaaataatccctagtatttctagcgctgagtatttt
aaactctataacaaaccgccttttgaatcaataaacaatgaaaataccaaattgaatact
aatgacaatgaagaagttaaaaaactagaatttgaattagctaaagaagtgcacatttta
atcctagagcaaaatttgctttcagcaacagattattattcttggatagacaaagatgat
tatgcgtcttttgcttggaaaatgcataggcttatcaatgaagataaactcaaagaaaac
catctcagcaccgataacgctaataagattaagcaatttttctttgataatggttttatt
ttaggctggactaaagaagaacaaagcgctatgcaagaaaacagagattattctttaaga
agcgctcttttgagtttggaagaaatcgctcaagcaaaaattgaattgcaaaaatactat
gaaagcgtttatgttaatggtgatgggaataaaagagaaatcaagcctttcaaagaaatt
ttaagagacatcaacaattttgaaaaagcttataaggagcgttatgacaaattggtaagc
ttgagtgcagcaatcatccaagctaaagaggggagtaatgagcagcaaaattctaacgca
aataacaataacacgattaaaaatacaatagagactaatacttctattggtaacaatatt
attaaaaataatgataataataaccccaatttaagcgttgctgatttagaattagagcaa
caaaatttaggagaacaaaatggaaaagaaagaacaaatcgcgcagatgagccgaataga
actagagcaggaattccgcaagaaattcaccgcagaagcgaacataaaggattgcaagag
agagtggagcgatcgagtgatgaagaactttcacaccaagactctagtttatttattgag
cctagagagcagggaggaacaagaggagtttatcgatctagcgaccaacaggcagtttca
gaaaaatcccatagagagagagatagattacatgaacatgtatctagaggagatggagta
tcagcaagagcagatagcaatggagcgtcaagtcaagcaagccgaatggaaaatggagca
agaagcgaagaaaagggggataatcccagcgatgagagaagagtatcacagacaccgcaa
tcctcatctcatcaacaaaatagctccagagatttggggctttctctctctagagaacag
ccaggacagactggacgcttacgcctttttgatcatggacagatgggctcattatttccc
acagaccatgaaaaccaaagagaaagaaacgataatgagcctgataaaagcagtgataga
gcaaacgaaaatggagacaaaagccctagacagaatggaagcacaaatcaagagggcgca
aggagtgagcgatatggaattgctcaaggaagcccaaatcaatcagtattaccacttgct
caaagccgattacatcatgcaggactcagcgcaccaaatggacttggaaaccttgaagaa
aacagggatcaaaagagaagacttttatcaaatttagaccatttagaaagcctgcttaac
gctattagaaacaacaccatagcgagtgagcctgacttcagatccaggctcttagaagcc
attcaaaacaacgagcctttaaaagatagccttgtagggatacaactccttaaagatcct
acaactaaaatcttttatgacaaattccaattaaaaatcagccctaaaaaagtcttagaa
attttagaaaatcgcattaaaaaatccattgaaacaacgaatgaaacgctaaacgcattc
aatgcgctggatagtcaagacattgatggaaacgctatttctagtagtgtaggattaaat
cccatacaagagaatgaaatagcagacaatagcgtagagttaaataacactcaagaacaa
accgcgcaagagcaaaacacacaagaaaacgcgcaaaccacgataaaacaagaaacacca
accgcaccagtcatcccccttaatcctaaaatagattttaaaccgagcgaagaagtttta
attaagggagctaaaactcgctataaggctaacattaaagccattgagcttttaaaagaa
ttgcaagccaaacaagagatcttaaaaggcgattattacgctactcaagaagagcaagaa
atcctagtgcaatttagcggatggggtgggttagaaagctgctttaaaaaggatcaacgc
cctgaagaatttaaagaattaaacgccttactcactaaagatgaattcagaagagcttat
tcaagcacaagagacgcttactacacccctaaattagtgattgatagcatttatcaggga
ttagatcaattagggttcaataacgacaaccatcaaaaagaaatctttgaacccagttta
ggcacaggcaaattcatcgctcatgcgccaagcgataagaattaccgctttatgggaaca
gaactagatcctattagcgctaatatttctaaattcctttatcctaatcaagtcatccaa
aacaccgctttagaaaaccaccaattctatcaagaatacgatgcgtttgtgggcaatcct
ccttatggcagtcataaaatctatagctccaatgacaaagaattgagtaacgagagcgtt
cataattactttttagggaaagctatcaaagaattgaaagatgatggcataggagctttt
gtggtgagttcttggtttatggatggtaaaaattctaaaatgagagaacacatcgcgcaa
aacgccacttttttaggagcgataagattgcctaatagcgtgtttaaagcaacaggcgct
gaagtgagtagcgatattgtgttttttaaaaaaggcgttgatgaagcaaccaatcaaagt
ttcactaaagctatgccttattatgacaagatcattgatagcttggatgatgacaccctt
tttgccttgcaaaacaaccgctttgatagtttcactcctagcgatcaacttaagattgtc
aatgcgattgcaagccattttggtttcaaacaagaaaaattgcaacgctggtatgaaaaa
atagacaccgctaactttggctacaaagaacaagactataagatcattaaagatttcatt
gataaagttggcgagaataatatcaatctcaacgaacaaaccttgaatgaatactttatc
cgccaccctgaaaacattctagggcatttgagtttggaaaaaacccgctatagctttgaa
ataaatggcgaacagatttataaatacgagttgcaagctttagaggataaaagcttagat
ttatcccaagctcttaatcaagcgatagaaaaattgcctaaaaatgtctatcaataccat
aagactacccttaaaacaaacgctctcatcattgatgccaataacgaacgctatgaagaa
gttcaaaagctaatcaaaaatttagaaaggggggaattagtcaagtgggataatctttat
ttccaactagaacaaaataatgaaatgggcgtctttttaaaacccactaaaaccaactct
aaagttcaagattcacgactaaaagcctattttaaaattaaagacgctttgaatgattta
acgagtgcggaattaagcccattaagctctgatttggaactaaaaagtaaaagagttagg
ctcaatcttgtttatgatgaatttgtcaagaaatttggctatctcaatgagaataaaaat
cgtaaggacatcaaacaagatttgtatggcgctaaagtcttaggattagaaaaagacttt
gagaaagaaatcacccccagaagcgctaaaatgcaaaacatagagccaaggcaagctcaa
gctaaaaaagctcaaatcttttttgaaaggactttaaaccctaaaaaagaacttattatc
actaacgctaaagaggcattgattgtaagcatcaatcaaaaagggtgtttggatttgcat
ttcattagagatcatttcacaacccaaagcttagaaaccacgattaaagaacttttggaa
caaaaacttatttataaagaccacaaggataatggcgactatgttttagcgaacgattat
ctaagcggtaatgtcaaaagaaaactcaaagaagttaaagaagccatcaatcaaggcgtg
gagggattagaggctaatgtgaaagatttagagctggttatccctaaagatttgaaagcc
actgaaatcatggctaataccaacagcccttggatacccactcagtatttagaagagttt
ttaatagaattagccgctaaccattatgaaaagcaatacggcgataaaatgacagattac
caactaggcaatctcaaagaagacatcaaagtagaacacctaagcggtgcttatgaagtt
tttgctagaaacaatgaattaaacgagctttatggtatcaggcataaagacaaaccgcat
tcttataaagtgccttttgaaagccttttaaataaagtcttaaacaacagggatttgagc
gttaaatacgcccaagttgatcctaatgaccctaaaaaagaaatctttatcactgatgaa
gagcaaagcaatctcgctagacaaaaagcagaagaattgaaagaagcttttaaagactgg
atttataaggattatgcaagaagaacccatttagagcaaatctataatgacactttcaac
aactctgttttaaaaacctatgatggctcgcaactagaactagaaggctttaaccatcat
atcagcttgcgctcccaccaaaagaacgctatttttagaaccatccaagacagggcggtg
tgtttagaccatcaggttggagcaggcaagaccttgtgcgctatagccagttgcatggaa
caaaaacgcatgggattagtgaataaaacgttcattgccgtgcccaaccatttaaccaag
caatggggcgatgaattttataaggcttaccctaacgctaatgtgttagtcgtggatagc
aaagatattaccgaaaaagaaagagagcttttattcaatcaaatcgctaacaacaattat
gacgctgtgattatcgcgcacacccatttggaattgttgtctaatcctagaggaattata
gaagaattgaaagaagaagagctagtgaatgccgaaaaaaactttgaaaggcaagaactg
gcttataaaaataaccctagagaaactaaaaaacccaatgaaagagtctttaaaaacaag
ctggataaaatccgcgctaaatacgatgcgattttagaaaaacaaggctctcatattgat
attagtcaaatggggattgacaatttgattgtagatgaagcccacttattcaaaaatcta
gcctttgaaacttctatggaaaaaattgcagggcttgggaaccaacaaggctctaatcgc
gccagagatttattcattaaaacgcgctacttgcatcaaaacaataagaaaatcatgttt
ttaaccggcacgcctatagctaattccttgagtgaaatgtatcacttgcaacgctattta
acccctgatgtgctgaaagaaagagggttagaattctttgatgattgggctaagacttat
ggggaagtggtgaatgattttgaattagacacaagcgctcaaagttataaaatggttaat
cgcttttctaaatttagcgatgtgcaaggcttaagcaccatgtatagagcttttgcagat
attgttagtaatgatgatattttaaagcataacccccactttgtgcctaaagtgtatggg
gataaacctatcaatgtggtggtgaaaagaagcgaagaagtggctcaatttattggcgtg
gctgatgaaaatggcaaatataatgaaggctctatcattgataggatgcaaaaatgcgag
ggcaagaaaagcaaaaaagggcaagacaatatcctttcttgcaccacagacgctagaaaa
gtggctttggattaccgcttgattgacccaagcactaaagtagaaaaagaattttctaaa
agctatgctatggcagaaaatatctatgagaattatttagaaactaatgccactaaaggc
acacaacttggtttcataggtctatccacacccaaaacccatagccaaaaagtgagttta
gaagcgccagataacgctcatgagatagaaaataaaaatcccctagatgaagctcaagaa
cttttagagagcttgtctagttatgatgaaaatggcaacttaatcgctcctagcaagaaa
gaattagagaacgaactcaaagagaaagaggttaaaagcgtcaatttagatgaagagata
gctaaaggctgttcgtttgatgtttatagcgatgtcttaaggcatttagtccaaatgggt
atcccacaaaatgaaatcgctttcatccatgacgcaaaaactgaagagcaaaaacaggat
ttgtttaaaaaaatcaatcgtggcgaagtcagggtattattgggcagtcccgctaaaatg
ggcgtaggcactaatgtgcaagagagattagtcgctatgcatgaattagattgcccatgg
aggcctgatgaattgttgcaaatggaagggcgtgggataagacaaggcaatattttgcac
caaaacgatcctgaaaattttagaatgaagatctatcgctacgccactgaaaaaacttat
gatagccgtatgtggtaa
DBGET
integrated database retrieval system
