Helicobacter pylori OK113: HPOK113_0725
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Entry
HPOK113_0725 CDS
T02510
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hpyo
Helicobacter pylori OK113
Pathway
hpyo03030
DNA replication
hpyo03430
Mismatch repair
hpyo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPOK113_0725 (dnaX)
03430 Mismatch repair
HPOK113_0725 (dnaX)
03440 Homologous recombination
HPOK113_0725 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpyo03032
]
HPOK113_0725 (dnaX)
03400 DNA repair and recombination proteins [BR:
hpyo03400
]
HPOK113_0725 (dnaX)
Enzymes [BR:
hpyo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPOK113_0725 (dnaX)
DNA replication proteins [BR:
hpyo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPOK113_0725 (dnaX)
DNA repair and recombination proteins [BR:
hpyo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPOK113_0725 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_14
RuvB_N
RCF1-5-like_lid
DNA_pol3_gamma3
AAA_5
EH_Signature
AAA_30
DEAD
AAA_assoc_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
BAM96633
LinkDB
All DBs
Position
complement(783655..785433)
Genome browser
AA seq
592 aa
AA seq
DB search
MQVLALKYRPKHFSELVGQESVAKTLSLALDNQRLANAYLFSGLRGSGKTSSSRIFARAL
MCEEGPKAVPCDTCAQCQSALNNHHIDIIEMDGASNRGIDDVRNLIEQTRYKPSFGRYKI
FIIDEVHMFTTEAFNALLKTLEEPPSHVKFLLATTDALKLPATILSRTQHFRFKKIPENS
VISHLKTILEKEQVSYETSALEKLAHSGQGSLRDTITLLEQAINYCDNAITESKVAEMLG
AIDRSVLEDFFQSLINQDEERLQERYAILENYETESVLEEMMLFLKAKLLSPDSYSILLI
ERFFKIIMSGLSLLKEGANASFVLLLLKMKFKEALKLKALDDAILELEQSKESVLKPLNQ
NANAFKQEPKIADKIEKPEKRESAQTPQTPMLSAKDRIFHNLFKQVQTLVYERNYELGAV
FEKNIRFIDFDSQTKTLTWESLATHKDKELLRERFKIVKSIVDGVFGKGENIKIALKNYS
ENKSAKEVVKEFKFSSLKPKPTTETTAEMKEKETKEAIEKETKEAIEKETKEAIEKETKE
AIEKETKENGTKEIQETQPKETPTALQEFMANHSNLIEEIKSEFEIKSVELL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttttagcgttaaaataccgccccaaacattttagcgagctagtcggtcaagag
agcgtggctaaaacgctttctttagccctagacaaccagcgtttggctaacgcttattta
ttcagcgggttaagaggttcaggcaaaaccagttcttctaggatttttgctagggcttta
atgtgtgaagaagggccaaaagccgtgccttgcgatacttgcgcccaatgccagagcgct
ttaaacaaccaccatatagatattatagaaatggacggagcgtctaatagggggattgat
gatgtccgtaatctcatagagcaaacgcgctacaaaccaagctttgggcgctataaaatc
tttatcattgatgaagtgcatatgttcaccaccgaagcgtttaacgcgcttttaaagact
ttagaagagcctcctagccatgtgaaattccttttagcgacaacggacgccttgaaattg
cccgctaccatactcagccgcacccagcatttcaggtttaaaaaaatccctgaaaattcc
gttatttctcatttaaaaaccattttagaaaaagaacaagtgagttatgaaacaagcgcg
ttagaaaaactggctcacagcgggcaggggagcttaagggatacgatcactcttttagag
caagccatcaattattgcgataacgctatcacagaaagcaaagtggctgaaatgttaggg
gcgattgacaggagcgttttagaagatttttttcaaagcctaatcaaccaagatgaagag
cgattgcaagagcgttatgccattttagaaaattatgaaaccgagagcgttttagaagaa
atgatgctttttttgaaagcgaaattattaagccctgattcgtattccatccttttaata
gagcgcttttttaaaatcattatgagtggtttgagccttttaaaagaaggggctaatgcc
agttttgtgctgttgttattgaaaatgaaattcaaagaagctttgaaactcaaagcccta
gacgatgcgattttggaattagagcaaagtaaagaaagcgttttaaagcccttaaaccaa
aatgctaacgcctttaaacaagaacccaaaatcgcagataaaatagaaaagccagaaaaa
agagaaagcgcacaaaccccgcaaactcccatgctttcagccaaagatcgcatttttcac
aaccttttcaaacaagttcaaacattggtttatgagcgcaattacgaattaggggcggtg
tttgaaaaaaatatccgtttcattgattttgacagccagactaaaaccttgacttgggag
tctttagccacccataaagataaagagcttttaagagagcgttttaaaattgtgaaaagt
atcgttgatggggtttttggcaagggcgaaaatatcaaaatcgctttaaaaaattattca
gaaaataaaagcgctaaagaagtggttaaagagtttaaattctcttctttaaagcccaaa
ccaaccaccgaaacgacggctgaaatgaaagaaaaagaaactaaagaagcgattgaaaaa
gaaactaaagaagcgattgaaaaagaaactaaagaagcgattgaaaaagaaactaaagaa
gcgattgaaaaagaaactaaagaaaacggcactaaagagattcaagaaacccaaccaaaa
gaaacccctacagccttgcaagaattcatggctaaccattccaatctcattgaagagatt
aagagcgagtttgaaatcaaaagcgtggaattgttatga
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